Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC107953.1-201ENST00000522216 297 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 PSMA3P-201ENST00000555485 635 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AC090897.2-201ENST00000581715 130 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AL031274.2-201ENST00000599419 203 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AC005034.5-201ENST00000604219 466 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AL670379.10-201ENST00000604330 253 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AL670379.9-201ENST00000605428 253 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AC092953.2-201ENST00000608000 699 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AC091953.2-201ENST00000623979 160 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AL138960.2-201ENST00000625145 535 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AC004808.1-201ENST00000627671 721 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 AL354685.2-201ENST00000448218 1447 ntBASIC1.57□□□□□ -2.16
RBFOX3A6NFN3 ZNF702P-202ENST00000434269 1966 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC138393.1-203ENST00000327086 343 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 SNORA4.1-201ENST00000364263 144 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 SNORA25B-201ENST00000365507 128 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 RNU6-898P-201ENST00000365627 104 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 RNU6-723P-201ENST00000383973 107 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 SNORA40.19-201ENST00000390846 128 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 RNU4-53P-201ENST00000410828 140 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 RPS12P24-201ENST00000412619 387 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 MTCO2P20-201ENST00000437339 673 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 RNU6-953P-201ENST00000459154 107 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC140059.1-201ENST00000489238 361 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC018868.1-201ENST00000491307 315 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC117522.2-201ENST00000510049 657 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 SNORA4.4-201ENST00000515921 135 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 RNA5SP281-201ENST00000516504 135 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC034114.1-201ENST00000520293 285 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC024614.2-201ENST00000577584 372 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 MIR544B-201ENST00000582372 78 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL391001.1-201ENST00000602747 715 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL670379.6-201ENST00000603753 252 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL670379.11-201ENST00000604059 253 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC069431.2-201ENST00000604149 1099 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC008162.1-201ENST00000604718 254 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC007363.1-201ENST00000604736 620 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL670379.1-201ENST00000604752 252 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL670379.5-201ENST00000605253 252 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL670379.12-201ENST00000605291 253 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL670379.8-201ENST00000605353 252 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL670379.7-201ENST00000605823 252 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC018645.2-201ENST00000609151 472 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AL355472.4-201ENST00000610233 626 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC022202.1-201ENST00000613515 211 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC008121.3-201ENST00000618726 433 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 AC005858.4-201ENST00000623191 700 ntBASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RBFOX3A6NFN3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AC006020.1-201ENST00000420179 1854 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 U3.13-201ENST00000364804 214 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 Y_RNA.534-201ENST00000384599 112 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 MIR301A-201ENST00000385261 86 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 SNORA40C-201ENST00000391285 128 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AC119751.3-201ENST00000399720 670 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 VN1R51P-201ENST00000411675 945 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 VPS26BP1-201ENST00000417155 755 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 XKRYP1-201ENST00000423438 492 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 XKRYP2-201ENST00000432915 492 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 TIMM9P1-201ENST00000436122 256 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AL353705.4-201ENST00000449661 238 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 BTF3P15-201ENST00000455606 336 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 snoU109.1-201ENST00000459339 135 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 HMGB1P35-201ENST00000503360 598 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 HMGB3P17-201ENST00000504195 649 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 SNORA31.19-201ENST00000517079 126 ntBASIC1.55□□□□□ -2.16
RBFOX3A6NFN3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms