Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 OR3A2-201ENST00000408891 1076 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 RNA5SP475-201ENST00000410568 110 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.35□□□□□ -1.55
RCCD1A6NED2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.35□□□□□ -1.55
RCCD1A6NED2 CKS1BP6-201ENST00000424932 240 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 RPL12P18-201ENST00000437175 325 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 AP000705.1-201ENST00000454567 350 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 snoU13.24-201ENST00000458998 104 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 RNA5SP103-201ENST00000459503 118 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 RPS23P7-201ENST00000466210 444 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 RN7SL466P-201ENST00000497546 295 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 CYCTP-201ENST00000504253 315 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 FTH1P11-201ENST00000517577 551 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.35□□□□□ -1.55
RCCD1A6NED2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.35□□□□□ -1.55
RCCD1A6NED2 AL589674.2-201ENST00000604304 337 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 AL359198.2-201ENST00000611836 194 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RCCD1A6NED2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RCCD1A6NED2 AL391516.1-201ENST00000554380 2449 ntBASIC5.35□□□□□ -1.55
RCCD1A6NED2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RCCD1A6NED2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.35□□□□□ -1.55
RCCD1A6NED2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.35□□□□□ -1.55
RCCD1A6NED2 AL672167.1-203ENST00000641299 2975 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 AL138820.1-201ENST00000617901 5305 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RCCD1A6NED2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RCCD1A6NED2 RN7SKP53-201ENST00000411337 315 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 AL160275.2-201ENST00000412010 394 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 AC012306.1-201ENST00000423267 114 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 AC092047.1-201ENST00000424997 240 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 RPS29P9-201ENST00000440360 171 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 RNA5SP362-201ENST00000516048 118 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 RNA5SP464-201ENST00000516251 108 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 AC007225.2-201ENST00000562529 256 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 AC011603.4-201ENST00000611325 277 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 MIR8069-1-201ENST00000616627 86 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 MIR8069-2-201ENST00000621412 86 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 AC074101.1-201ENST00000637861 241 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
RCCD1A6NED2 ASNSP1-201ENST00000518311 1939 ntBASIC5.34□□□□□ -1.55
RCCD1A6NED2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.34□□□□□ -1.56
RCCD1A6NED2 AL356489.2-201ENST00000566968 3528 ntBASIC5.34□□□□□ -1.56
RCCD1A6NED2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RCCD1A6NED2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RCCD1A6NED2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RCCD1A6NED2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RCCD1A6NED2 AC073073.2-201ENST00000609827 2578 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RCCD1A6NED2 AC104260.2-201ENST00000623551 3497 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 SNORA63.4-201ENST00000362763 126 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 RNU6-245P-201ENST00000384020 107 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 RPS20P14-201ENST00000412545 360 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 FAR2P2-201ENST00000413041 594 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 AC244670.1-201ENST00000436879 112 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 RPS11P7-201ENST00000442125 465 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 AL389915.2-201ENST00000454576 441 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 HMGB1P22-201ENST00000505315 124 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 SNORA31.8-201ENST00000516327 108 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 RNU6-659P-201ENST00000516454 104 ntBASIC5.33□□□□□ -1.56
RCCD1A6NED2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RCCD1A6NED2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.33□□□□□ -1.56
RCCD1A6NED2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RCCD1A6NED2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RCCD1A6NED2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RCCD1A6NED2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RCCD1A6NED2 RNA5SP183-201ENST00000362452 119 ntBASIC5.32□□□□□ -1.56
RCCD1A6NED2 RN7SKP224-201ENST00000364140 325 ntBASIC5.32□□□□□ -1.56
RCCD1A6NED2 RNU1-100P-201ENST00000365255 165 ntBASIC5.32□□□□□ -1.56
RCCD1A6NED2 MIR600-201ENST00000385007 98 ntBASIC5.32□□□□□ -1.56
RCCD1A6NED2 SNORD37.2-201ENST00000391075 66 ntBASIC5.32□□□□□ -1.56
RCCD1A6NED2 EIF4HP2-201ENST00000424380 563 ntBASIC5.32□□□□□ -1.56
RCCD1A6NED2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.32□□□□□ -1.56
RCCD1A6NED2 AC125238.1-201ENST00000448842 249 ntBASIC5.32□□□□□ -1.56
RCCD1A6NED2 snoU13.4-201ENST00000458916 104 ntBASIC5.32□□□□□ -1.56
RCCD1A6NED2 AC007215.1-201ENST00000464893 276 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms