Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-1092P-201ENST00000516955 87 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 HSPE1P18-201ENST00000517602 280 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC103810.1-201ENST00000579873 453 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AL161734.1-201ENST00000609720 557 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 UCA1.1-201ENST00000620952 75 ntBASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.3□□□□□ -2.04
SMIM28A0A1B0GU29 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 U8.3-201ENST00000363321 132 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 Y_RNA.598-201ENST00000410480 95 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 HMGN1P14-201ENST00000412459 517 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC009518.2-201ENST00000418056 731 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 GPM6BP2-201ENST00000432046 144 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 RPL36AP53-201ENST00000432891 316 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC104850.1-201ENST00000435940 476 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 RPS15AP5-201ENST00000436276 388 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC009296.1-201ENST00000443146 155 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 GPM6BP1-201ENST00000446387 144 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 SNORD97-201ENST00000459187 142 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 MRPS36P2-201ENST00000512569 299 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 Y_RNA.672-201ENST00000516289 104 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 RNU2-46P-201ENST00000517038 113 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC022634.1-201ENST00000520765 532 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC087241.2-201ENST00000535801 324 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC005498.1-201ENST00000592125 465 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AL670379.6-201ENST00000603753 252 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AL670379.11-201ENST00000604059 253 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 Z94722.1-201ENST00000604328 474 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC008162.1-201ENST00000604718 254 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AL670379.1-201ENST00000604752 252 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC121247.2-201ENST00000604776 136 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AL670379.5-201ENST00000605253 252 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AL670379.12-201ENST00000605291 253 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AL670379.8-201ENST00000605353 252 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AL670379.7-201ENST00000605823 252 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC008498.1-201ENST00000613012 531 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AC025048.6-202ENST00000627667 438 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 CU459211.1-201ENST00000635667 749 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 AP003399.1-201ENST00000637534 361 ntBASIC2.29□□□□□ -2.04
SMIM28A0A1B0GU29 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 CR848007.1-201ENST00000442354 1699 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 U3.4-201ENST00000363352 213 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-946P-201ENST00000383878 107 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-817P-201ENST00000391083 104 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-195P-201ENST00000411352 109 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 RPS3AP3-201ENST00000411933 242 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 BPY2DP-201ENST00000422208 265 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AL358075.3-201ENST00000426289 226 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AL031667.1-201ENST00000440222 725 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC107626.1-201ENST00000471084 183 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC022616.3-201ENST00000523940 148 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 RANP3-201ENST00000530970 276 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 OR5B19P-201ENST00000531766 928 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC025811.1-201ENST00000604312 472 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AP002360.4-201ENST00000606980 481 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC013562.2-201ENST00000611632 603 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC025594.3-201ENST00000613068 790 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 AC130324.3-201ENST00000614165 542 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 MIR6715A-201ENST00000615929 79 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 MTND5P42-201ENST00000637720 498 ntBASIC2.28□□□□□ -2.04
SMIM28A0A1B0GU29 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 FGF7P2-201ENST00000332473 296 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 HSPE1P11-201ENST00000339579 310 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 Y_RNA.22-201ENST00000362492 102 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 SNORD56.2-201ENST00000363242 71 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 Y_RNA.534-201ENST00000384599 112 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 RPL23AP32-201ENST00000395315 459 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms