Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNA5SP190-201ENST00000365222 118 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 SNORD14D-201ENST00000384390 87 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 RPL36AP53-201ENST00000432891 316 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 HMGB1P31-201ENST00000437242 427 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 AC114878.1-201ENST00000441166 358 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 AC017099.1-201ENST00000448261 1028 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 snoU13.9-201ENST00000458927 103 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU1-123P-201ENST00000458950 160 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 FAM92A1P2-202ENST00000504766 877 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 MTND5P13-201ENST00000513046 1079 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 RPL21P5-201ENST00000554662 472 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 AC091965.5-201ENST00000624785 342 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 AC019226.1-201ENST00000625666 515 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 MIR1322-201ENST00000638013 71 ntBASIC0.9□□□□□ -2.27
TRBV27A0A0K0K1C4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 NACAP2-201ENST00000318548 624 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU1-58P-201ENST00000362413 163 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 OR6C5P-201ENST00000452388 923 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 MEMO1P3-201ENST00000459811 302 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 RPS15AP36-201ENST00000492022 382 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 RNA5SP445-201ENST00000515889 115 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-678P-201ENST00000516832 109 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 ACA59.2-201ENST00000517061 156 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-902P-201ENST00000517212 91 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-586P-201ENST00000517265 104 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AC090821.2-201ENST00000523552 176 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AP003033.1-201ENST00000527244 415 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AP000763.2-201ENST00000540641 163 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AC067805.1-201ENST00000559344 470 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AL022345.1-201ENST00000607292 135 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AC009237.15-201ENST00000610252 501 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AC009268.2-201ENST00000621925 457 ntBASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.89□□□□□ -2.27
TRBV27A0A0K0K1C4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AP005901.5-201ENST00000545779 1796 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 SNRPEP3-201ENST00000338402 276 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-549P-201ENST00000384433 107 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 MIR634-201ENST00000385208 97 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-1300P-201ENST00000391046 108 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AL133475.1-201ENST00000404414 305 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-174P-201ENST00000410406 106 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 RNA5SP100-201ENST00000410903 110 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 RNA5SP59-201ENST00000410922 110 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 GPM6BP2-201ENST00000432046 144 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 GPM6BP1-201ENST00000446387 144 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC245517.4-201ENST00000448601 281 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 RPS29P29-201ENST00000456396 171 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 PRELID3BP1-201ENST00000457142 540 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC098799.1-201ENST00000504752 800 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC109927.2-201ENST00000506416 303 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 MTCYBP16-201ENST00000509187 1129 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 RNU6-714P-201ENST00000516963 103 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC103987.3-201ENST00000582071 292 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AF038458.1-201ENST00000588406 262 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC091057.3-201ENST00000602684 733 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AL645939.4-201ENST00000604495 135 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC034229.4-201ENST00000607861 441 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 TUG1_2.1-201ENST00000614234 87 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 MIR6852-201ENST00000621699 66 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC090517.3-201ENST00000625170 141 ntBASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRBV27A0A0K0K1C4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 AC002543.1-201ENST00000299783 1954 ntBASIC0.87□□□□□ -2.27
TRBV27A0A0K0K1C4 OR5T3-201ENST00000303059 1023 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms