Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA9Q9Y5G4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR423-201ENST00000362201 94 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 RNA5SP124-201ENST00000362739 110 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORD3E-201ENST00000362899 217 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-270P-201ENST00000364131 105 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-593P-201ENST00000364716 112 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 RN7SKP156-201ENST00000410308 342 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC236972.2-201ENST00000434979 310 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 BTF3P15-201ENST00000455606 336 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AP002884.2-201ENST00000471647 395 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC084198.1-201ENST00000477747 402 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC096745.1-201ENST00000509945 370 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-273P-201ENST00000516937 96 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC026403.1-201ENST00000518938 295 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC025423.5-201ENST00000550230 219 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC063950.1-201ENST00000552036 308 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC019176.2-201ENST00000611579 315 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC084757.4-201ENST00000616350 526 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 U6.98-201ENST00000637157 84 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC233263.6-201ENST00000631132 1963 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AC007256.1-201ENST00000392253 2765 ntBASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA9Q9Y5G4 AL353746.1-201ENST00000566293 6881 ntBASIC3.71□□□□□ -1.81
PCDHGA9Q9Y5G4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHGA9Q9Y5G4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHGA9Q9Y5G4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.81
PCDHGA9Q9Y5G4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 SNORA73.2-201ENST00000364946 201 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 Y_RNA.431-201ENST00000384086 102 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AL391417.1-201ENST00000404100 426 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 U3.37-201ENST00000408528 213 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 RNA5SP38-201ENST00000410750 119 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 RPL37P10-201ENST00000412884 288 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 SKA2P1-201ENST00000425592 390 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC011742.1-201ENST00000431448 434 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 SETP5-201ENST00000437270 562 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 MTND1P17-201ENST00000448961 204 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC233279.1-201ENST00000455300 423 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 snoU13.28-201ENST00000459235 104 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 RN7SL323P-201ENST00000494712 295 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 H3F3AP1-201ENST00000559984 334 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AC025627.2-201ENST00000576220 160 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 MIR7702-201ENST00000621931 59 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 AL133216.2-202ENST00000634512 349 ntBASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA9Q9Y5G4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-1329P-201ENST00000365664 107 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 RN7SKP158-201ENST00000410453 326 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 RNA5SP31-201ENST00000411144 127 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 PGBD4P6-201ENST00000421501 610 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 AC098831.1-201ENST00000440661 216 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 UBE2V1P7-201ENST00000446395 340 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 RPS27P27-201ENST00000498779 255 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 COPS8P3-201ENST00000526024 482 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 AL391261.3-201ENST00000557194 520 ntBASIC3.7□□□□□ -1.82
PCDHGA9Q9Y5G4 CYCSP39-201ENST00000565821 309 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms