Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 RNA5SP454-201ENST00000517231 127 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 TRAV37-201ENST00000553906 342 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC007151.1-201ENST00000572774 483 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC005183.1-201ENST00000603687 1979 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 CUL1P1-201ENST00000509510 2425 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AC002546.1-201ENST00000588041 2504 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 SNORD116-11-201ENST00000383882 92 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.431-201ENST00000384086 102 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-692P-201ENST00000384496 107 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RNVU1-14-201ENST00000384770 164 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RN7SKP53-201ENST00000411337 315 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AL512844.2-201ENST00000433990 593 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 SNRPEP9-201ENST00000436794 238 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RPL7P28-201ENST00000437739 740 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 SNORA71B-202ENST00000439232 272 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 ANP32BP2-201ENST00000454525 545 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RN7SL93P-201ENST00000463035 293 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AL133162.1-201ENST00000463228 453 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RPL7P43-201ENST00000478876 753 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RN7SL293P-201ENST00000481765 281 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RNA5SP165-201ENST00000517142 115 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-323P-201ENST00000521915 107 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AC020914.4-201ENST00000597690 277 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AC244505.7-201ENST00000599675 272 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 SNORA62.6-201ENST00000606322 83 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 AC099506.2-201ENST00000623074 221 ntBASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHB1Q9Y5F3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AC066616.2-201ENST00000559334 1481 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-266P-201ENST00000364225 107 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-214P-201ENST00000384130 107 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-140P-201ENST00000384566 108 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 MIR325-201ENST00000385260 98 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 RNA5SP424-201ENST00000390988 115 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AL360182.1-201ENST00000397433 468 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 MIR548K-201ENST00000408406 116 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 YPEL5P1-201ENST00000419731 367 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AP000907.1-201ENST00000428428 510 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AC092573.2-201ENST00000434546 243 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AC236972.2-201ENST00000434979 310 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AC005019.1-201ENST00000436455 431 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 HMGN2P7-201ENST00000456186 273 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.635-201ENST00000459041 101 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 RNA5SP208-201ENST00000516156 78 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-273P-201ENST00000516937 96 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 SNORA25.17-201ENST00000517184 124 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AC022695.1-201ENST00000522089 237 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 MIR4790-201ENST00000577799 79 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AC004805.2-201ENST00000605382 482 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 AL138726.1-201ENST00000614873 333 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 RMST_4.1-201ENST00000616886 107 ntBASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
PCDHB1Q9Y5F3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB1Q9Y5F3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms