Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC025033.1-201ENST00000463883 194 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC010587.2-201ENST00000511727 448 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 FAM92A1P1-201ENST00000528023 890 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AP000907.2-201ENST00000530827 353 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AL713866.2-201ENST00000603579 219 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC006386.1-201ENST00000619436 415 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 MIR6873-201ENST00000622788 63 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 FRG1KP-201ENST00000623592 341 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 RNU6-288P-201ENST00000363690 104 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 U3.13-201ENST00000364804 214 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AL033519.2-201ENST00000403958 392 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AL356432.1-201ENST00000405809 419 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC140059.1-201ENST00000489238 361 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 SNORA19.3-201ENST00000516165 130 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC026464.5-201ENST00000562497 722 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC009063.1-201ENST00000563342 702 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC243960.4-201ENST00000600532 288 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AL358072.1-201ENST00000604156 575 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AC098657.3-201ENST00000620434 263 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 AL136313.1-201ENST00000624804 202 ntBASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
RHBDD3Q9Y3P4 RNY4P24-201ENST00000362735 96 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 Y_RNA.111-201ENST00000363248 100 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 RNU6-14P-201ENST00000384630 106 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 RNA5SP450-201ENST00000411206 102 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 RPS3AP37-201ENST00000419176 745 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC096920.1-201ENST00000423991 241 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AL592045.1-201ENST00000429867 352 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 MTND4P25-201ENST00000441039 533 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 USP9YP8-201ENST00000441913 500 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 RPL23AP6-201ENST00000446637 472 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 SNORD97-201ENST00000459187 142 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC104982.1-201ENST00000478775 574 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC011005.2-201ENST00000487324 359 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 HMGB1P35-201ENST00000503360 598 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC008413.1-201ENST00000511864 177 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC119751.5-201ENST00000514077 770 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 SNORA4.4-201ENST00000515921 135 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 SNORA25.11-201ENST00000515935 105 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 RNU6-572P-201ENST00000516724 80 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AL512310.1-201ENST00000548639 172 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC233702.2-202ENST00000562547 291 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 SNRPGP17-201ENST00000603780 214 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AL592221.1-201ENST00000605266 382 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AC091965.5-201ENST00000624785 342 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 AL354685.2-201ENST00000448218 1447 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 MTND4P1-201ENST00000457501 1466 ntBASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RHBDD3Q9Y3P4 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.8□□□□□ -2.12
RHBDD3Q9Y3P4 RPS12P24-201ENST00000412619 387 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms