Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC0.41□□□□□ -2.34
MACF1Q9UPN3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.41□□□□□ -2.34
MACF1Q9UPN3 RNU4-67P-201ENST00000364569 141 ntBASIC0.41□□□□□ -2.34
MACF1Q9UPN3 NUP35P2-201ENST00000416748 943 ntBASIC0.41□□□□□ -2.34
MACF1Q9UPN3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.41□□□□□ -2.34
MACF1Q9UPN3 AC093852.1-201ENST00000503587 266 ntBASIC0.41□□□□□ -2.34
MACF1Q9UPN3 AC136932.1-201ENST00000574771 208 ntBASIC0.41□□□□□ -2.34
MACF1Q9UPN3 HMGN1P30-201ENST00000589286 268 ntBASIC0.41□□□□□ -2.34
MACF1Q9UPN3 AC090186.1-201ENST00000605991 572 ntBASIC0.41□□□□□ -2.34
MACF1Q9UPN3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.41□□□□□ -2.34
MACF1Q9UPN3 Y_RNA.326-201ENST00000365176 113 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 AC083799.1-201ENST00000366451 910 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC0.4□□□□□ -2.34
MACF1Q9UPN3 RNU4-63P-201ENST00000411313 118 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 AL353621.1-201ENST00000418219 243 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 DPPA2P1-201ENST00000428060 556 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 MIR548AX-201ENST00000580117 73 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 VN1R79P-201ENST00000593540 513 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 VTRNA2-1-201ENST00000602301 127 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 RNU4-16P-201ENST00000364737 141 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 RNU6-1029P-201ENST00000384109 107 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 AL138880.1-201ENST00000405824 642 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 CCNG1P1-201ENST00000406783 885 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 MRPS10P2-201ENST00000431226 381 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.4□□□□□ -2.34
MACF1Q9UPN3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.4□□□□□ -2.34
MACF1Q9UPN3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.4□□□□□ -2.34
MACF1Q9UPN3 AC012443.1-201ENST00000605605 231 ntBASIC0.4□□□□□ -2.34
MACF1Q9UPN3 RNU6-1309P-201ENST00000363305 108 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 SUMO2P12-201ENST00000405924 140 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC007098.1-201ENST00000420122 367 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 MTND5P25-201ENST00000430499 799 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC136619.2-201ENST00000563361 631 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC010809.3-201ENST00000621310 641 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RNU4-15P-201ENST00000362613 141 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RNU6-1044P-201ENST00000384755 107 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 MIR758-201ENST00000390227 88 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RPS15AP38-201ENST00000413110 372 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 MTCYBP45-201ENST00000435243 565 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AL360221.1-201ENST00000445989 335 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC067904.2-201ENST00000517322 1283 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 BTF3P12-201ENST00000519620 469 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 OR5AK1P-201ENST00000524837 922 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.4□□□□□ -2.35
MACF1Q9UPN3 NUTF2P8-201ENST00000604593 363 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC073111.2-201ENST00000605657 1075 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 Y_RNA.781-201ENST00000620301 103 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.4□□□□□ -2.35
MACF1Q9UPN3 MTND5P33-201ENST00000571250 1450 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RNU6-1339P-201ENST00000363574 91 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 SEPT7P3-201ENST00000455017 621 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AL109741.2-201ENST00000455561 343 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RPL30P15-201ENST00000457129 321 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 SNORA31.25-201ENST00000517242 134 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC141557.1-201ENST00000540982 400 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC007363.1-201ENST00000604736 620 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC097372.5-201ENST00000623665 376 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 Y_RNA.57-201ENST00000362806 113 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RNU6-674P-201ENST00000363831 107 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RPS29P23-201ENST00000458635 123 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC074133.1-201ENST00000515696 183 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.4□□□□□ -2.35
MACF1Q9UPN3 SNX3P1Y-201ENST00000615757 176 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AL591926.4-201ENST00000616895 298 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AL603758.1-201ENST00000618654 241 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 AC022960.3-201ENST00000619794 441 ntBASIC0.4□□□□□ -2.35
MACF1Q9UPN3 RNA5SP451-201ENST00000410588 110 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AC109327.2-201ENST00000448339 378 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 COX6CP18-201ENST00000448769 222 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AC040926.1-201ENST00000530195 238 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 CYP4A27P-201ENST00000567218 190 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 MTCO3P13-201ENST00000577757 781 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 MTND2P41-201ENST00000637599 773 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 CASC19-280ENST00000642102 1351 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 RNA5SP299-201ENST00000391203 116 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 RSU1P2-202ENST00000437884 485 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AL022238.1-201ENST00000442557 355 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 FO393415.2-201ENST00000480085 343 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.39□□□□□ -2.35
MACF1Q9UPN3 PART1_2.1-201ENST00000612397 250 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 RNU6-553P-201ENST00000364047 96 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 Y_RNA.222-201ENST00000364264 102 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 RN7SKP61-201ENST00000410642 295 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 AC099677.1-201ENST00000420575 175 ntBASIC0.39□□□□□ -2.35
MACF1Q9UPN3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms