Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC007064.1-201ENST00000412238 351 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 ELOCP17-201ENST00000414751 326 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 MTND4LP11-201ENST00000422184 280 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AL022400.1-201ENST00000423946 935 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AC098614.2-201ENST00000426040 255 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 USP12PX-201ENST00000432383 1057 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 UBE2FP3-201ENST00000436366 524 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 MTATP6P23-201ENST00000440153 476 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AL031667.1-201ENST00000440222 725 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AC009296.1-201ENST00000443146 155 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 RPS15AP27-201ENST00000449183 343 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 RBM43P1-201ENST00000476891 1081 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 RPL36AP51-201ENST00000487216 318 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AC138853.1-201ENST00000503549 823 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AC113155.1-201ENST00000511141 769 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 MTND4LP26-201ENST00000518144 282 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 MIR544B-201ENST00000582372 78 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AC087241.4-201ENST00000612441 480 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AC008498.1-201ENST00000613012 531 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AC011890.2-201ENST00000613393 294 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 PABPC1P9-201ENST00000426076 1612 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 Z82209.1-201ENST00000422141 2135 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 RNU6-660P-201ENST00000364566 109 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 SNORA75-201ENST00000384158 137 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 Z98742.3-201ENST00000418637 326 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 OOSP1P1-201ENST00000423265 274 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 ZNF863P-201ENST00000426746 417 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 RNU7-59P-201ENST00000459101 61 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC008481.1-201ENST00000463278 396 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC109486.1-201ENST00000486833 374 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC011352.1-201ENST00000512300 793 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AP002963.1-201ENST00000530590 184 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AP004247.1-201ENST00000531556 1289 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC016957.1-201ENST00000534895 309 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC002545.1-201ENST00000592511 181 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AL645944.1-201ENST00000603857 493 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AL136363.2-201ENST00000604173 851 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC136601.2-201ENST00000604356 474 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC103810.6-201ENST00000606708 136 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC109347.2-201ENST00000610220 349 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC092794.1-201ENST00000612734 582 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC012150.2-201ENST00000621300 544 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 MIR1291-201ENST00000627649 87 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC068137.3-201ENST00000639191 341 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 AC073869.6-201ENST00000640656 341 ntBASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
CLIP2Q9UDT6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RNU6-500P-201ENST00000362349 107 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 MIR548F1-201ENST00000408667 84 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RNU2-16P-201ENST00000410712 136 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 CYCSP46-201ENST00000423569 204 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RPS15AP7-201ENST00000439294 405 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 WASF1P1-201ENST00000447560 1131 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RNU6-956P-201ENST00000458868 103 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 ANXA2P1-201ENST00000505539 926 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 MTND2P33-201ENST00000506452 1031 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RNU1-41P-201ENST00000516161 162 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RNU1-48P-201ENST00000516400 162 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RNA5SP281-201ENST00000516504 135 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 RNA5SP82-201ENST00000516707 92 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 EIF1P4-201ENST00000572664 335 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 AC087683.1-201ENST00000591187 441 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 FTX_3.1-201ENST00000610451 147 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 Z99129.1-201ENST00000612510 255 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 AL356266.1-201ENST00000623311 483 ntBASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.79□□□□□ -1.96
CLIP2Q9UDT6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 RNU5A-2P-201ENST00000384337 116 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 RNU6-140P-201ENST00000384566 108 ntBASIC2.78□□□□□ -1.96
CLIP2Q9UDT6 SNORA41-201ENST00000384675 132 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms