Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC104237.2-201ENST00000612456 443 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AC011939.3-201ENST00000613686 466 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 AL603755.1-201ENST00000619504 163 ntBASIC2.09□□□□□ -2.07
CLCF1Q9UBD9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
CLCF1Q9UBD9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.09□□□□□ -2.08
CLCF1Q9UBD9 AC010889.1-201ENST00000566193 2666 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 NACAP2-201ENST00000318548 624 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 HSPE1P11-201ENST00000339579 310 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 RNU6-658P-201ENST00000384606 106 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AL513475.1-201ENST00000406602 315 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 BTF3P7-201ENST00000407097 488 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 RNA5SP425-201ENST00000410336 112 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AL356583.2-201ENST00000426536 280 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AL592045.1-201ENST00000429867 352 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 RPS15AP7-201ENST00000439294 405 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 COX6CP12-201ENST00000446748 202 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 DPPA3P1-201ENST00000448050 469 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 ART2BP-201ENST00000453501 499 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC109486.1-201ENST00000486833 374 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 NDUFB4P2-201ENST00000509515 391 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC098591.2-201ENST00000510152 315 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC022447.1-201ENST00000515358 464 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 RNU7-51P-201ENST00000516560 62 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 RNU6-759P-201ENST00000516740 103 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 RNA5SP337-201ENST00000517007 109 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 SCARNA11.3-201ENST00000517276 130 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 COX6CP5-201ENST00000527162 228 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 OR1M4P-201ENST00000589199 287 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 MTND5P42-201ENST00000637720 498 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 MIR7515-201ENST00000637837 67 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 MTND4P4-201ENST00000439033 1366 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 MTND4P35-201ENST00000604257 1375 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 ADAM3A-203ENST00000461344 2157 ntBASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
CLCF1Q9UBD9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 MAPK10-266ENST00000641066 6555 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 SNORD114-30-201ENST00000364448 72 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 MIR301A-201ENST00000385261 86 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 Y_RNA.598-201ENST00000410480 95 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 RN7SKP284-201ENST00000411002 343 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC107081.1-201ENST00000414975 361 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC092427.1-202ENST00000430569 476 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 SNRPFP4-201ENST00000456366 242 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 TRBV1-201ENST00000476502 284 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC139453.3-201ENST00000493276 369 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC010587.1-201ENST00000505809 469 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AP003181.2-201ENST00000528941 181 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC021739.1-201ENST00000559631 174 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 ROCK1P1-201ENST00000573767 549 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AC024619.4-201ENST00000580924 316 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 NIFKP6-201ENST00000598115 845 ntBASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CLCF1Q9UBD9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC073343.1-201ENST00000328239 651 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 MIR6073-201ENST00000352083 89 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 U8.2-201ENST00000363156 134 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 SNORD56.2-201ENST00000363242 71 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 RNU6-946P-201ENST00000383878 107 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AL356057.2-201ENST00000403318 432 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 RNU2-8P-201ENST00000410727 190 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC007064.1-201ENST00000412238 351 ntBASIC2.06□□□□□ -2.08
CLCF1Q9UBD9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms