Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 SDCBPP3-201ENST00000419629 891 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 MYL8P-204ENST00000431574 518 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 OR2B8P-201ENST00000432841 938 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 MTATP6P16-201ENST00000434543 526 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC112220.1-201ENST00000434628 355 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 NDUFB1P2-201ENST00000449477 176 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC092001.1-201ENST00000453012 261 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 RPL21P39-201ENST00000463605 483 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC090525.1-201ENST00000479116 478 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 RPL21P93-201ENST00000480465 489 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC087190.1-201ENST00000484462 480 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC093591.1-201ENST00000491435 481 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 RPL21P16-201ENST00000495531 483 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-1220P-201ENST00000517126 108 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 ZNF861P-201ENST00000588126 639 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC005261.5-201ENST00000596280 355 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC087045.1-201ENST00000605856 382 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AL121992.2-201ENST00000606262 256 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.09□□□□□ -1.92
BLOC1S4Q9NUP1 AC093536.2-201ENST00000565257 1406 ntBASIC3.09□□□□□ -1.92
BLOC1S4Q9NUP1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
BLOC1S4Q9NUP1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
BLOC1S4Q9NUP1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 MIR26A1-201ENST00000362205 77 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-166P-201ENST00000384371 107 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 RNA5SP111-201ENST00000411386 101 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC103975.1-201ENST00000482506 483 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC117522.3-201ENST00000507974 584 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 MTCYBP20-201ENST00000524239 1129 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 OR5AQ1P-201ENST00000527596 927 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 MIR3913-1-201ENST00000577744 102 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 MIR3605-201ENST00000583214 100 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 MIR3117-201ENST00000584034 78 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC110760.3-201ENST00000598794 467 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC126118.1-201ENST00000607744 628 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 uc_338.11-201ENST00000619132 160 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AC022079.1-201ENST00000621546 602 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 AL390237.1-201ENST00000404226 1415 ntBASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
BLOC1S4Q9NUP1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 Z98749.2-208ENST00000381646 500 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 MIR34A-201ENST00000385130 110 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL138827.1-201ENST00000402666 306 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 MIR1302-8-201ENST00000408342 128 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 BX682237.1-201ENST00000415016 335 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 BX295541.1-201ENST00000417774 250 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 MTCYBP5-201ENST00000423752 1135 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL627311.1-201ENST00000431514 115 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC107083.1-201ENST00000439643 279 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL445687.1-201ENST00000439946 251 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 RPL22P13-201ENST00000493291 347 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC116655.1-201ENST00000508324 901 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 MTCO3P28-201ENST00000513351 515 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 RNA5SP76-201ENST00000516277 87 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 RPPH1-2P-201ENST00000516688 293 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 RNU6-685P-201ENST00000517088 95 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC109329.2-201ENST00000519658 482 ntBASIC3.07□□□□□ -1.92
BLOC1S4Q9NUP1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms