Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 MIR34A-201ENST00000385130 110 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 MIR301A-201ENST00000385261 86 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AC023141.4-201ENST00000412031 328 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 HMGN2P35-201ENST00000412164 270 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 RPLP0P7-201ENST00000416050 667 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 BX295541.1-201ENST00000417774 250 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AL592045.1-201ENST00000429867 352 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 MTCO2P18-201ENST00000457151 658 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AC126182.1-201ENST00000478134 357 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 SNORA18.6-201ENST00000516792 115 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AP002963.1-201ENST00000530590 184 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AP002453.2-201ENST00000533503 320 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 ELOCP31-201ENST00000540463 467 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 MIR3167-201ENST00000579623 85 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AC103987.3-201ENST00000582071 292 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 MIR3611-201ENST00000584484 83 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AC064872.1-201ENST00000604823 1072 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AC022893.3-201ENST00000607665 437 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 AC103591.3-201ENST00000608684 209 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
SMC4Q9NTJ3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SMC4Q9NTJ3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.34□□□□□ -1.88
SMC4Q9NTJ3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AC062016.1-201ENST00000355719 319 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 RNU6-39P-201ENST00000384344 107 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AC127391.1-201ENST00000411737 98 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AC080125.1-201ENST00000414888 684 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 CDK8P2-201ENST00000415020 547 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 MTND3P17-201ENST00000416968 344 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 USP9YP14-201ENST00000430663 563 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AC073614.1-201ENST00000438690 650 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 KATNBL1P3-201ENST00000443475 909 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 SRIP1-201ENST00000489235 288 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 SEM1P1-201ENST00000506694 209 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 RNA5SP282-201ENST00000516355 108 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AC109347.2-201ENST00000610220 349 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 AL133173.2-201ENST00000614270 90 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 UCA1.1-201ENST00000620952 75 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.33□□□□□ -1.88
SMC4Q9NTJ3 NACAP2-201ENST00000318548 624 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 SNORD62.1-201ENST00000362541 86 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 SNORD21-201ENST00000383953 95 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 RNU2-39P-201ENST00000410604 198 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 USP9YP20-201ENST00000419224 558 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 BRK1P2-201ENST00000442875 223 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 RPS15AP27-201ENST00000449183 343 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AC108938.1-201ENST00000451204 136 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AC093899.1-201ENST00000457984 376 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AC128713.1-201ENST00000471495 306 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 RPL31P41-201ENST00000477967 372 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 MTCO3P7-201ENST00000510008 774 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AC096725.1-201ENST00000514266 313 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 RNU6-914P-201ENST00000516749 109 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AC010546.1-201ENST00000569391 485 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 MTND1P15-201ENST00000579262 949 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AP000787.2-201ENST00000604432 568 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 AC013562.2-201ENST00000611632 603 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 Z99571.1-201ENST00000636677 394 ntBASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SMC4Q9NTJ3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 RNU6-169P-201ENST00000365336 107 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 RNU1-109P-201ENST00000383960 147 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 RNU6-750P-201ENST00000390946 107 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AL139039.1-201ENST00000401900 692 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AL139095.1-201ENST00000404326 391 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 RNA5SP184-201ENST00000411071 108 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AL353729.1-201ENST00000425044 720 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC063976.3-201ENST00000426849 329 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms