Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNU6-216P-201ENST00000363282 104 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 RNU1-22P-201ENST00000363334 158 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 HMGN1P14-201ENST00000412459 517 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AL161449.1-201ENST00000414531 1199 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 PPP1R11P2-201ENST00000423543 382 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 RPS6P15-201ENST00000431996 751 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC002381.1-201ENST00000447049 280 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 snoU109.1-201ENST00000459339 135 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC090330.1-201ENST00000588646 764 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AL138963.2-201ENST00000605137 226 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 AL118508.4-201ENST00000624142 1176 ntBASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KIAA1549Q9HCM3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 SNORD114-22-201ENST00000365423 72 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 MIR506-201ENST00000384998 124 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AP002784.2-201ENST00000397300 549 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 RPS12P24-201ENST00000412619 387 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 FABP5P14-201ENST00000437273 393 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 MTND6P13-201ENST00000443510 523 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 RPS15AP17-201ENST00000470598 390 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC010468.3-201ENST00000508225 458 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 FAM206BP-201ENST00000510179 541 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 RNA5SP490-201ENST00000517141 136 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 CBX3P7-201ENST00000532876 502 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC022254.1-201ENST00000567857 235 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC090079.2-201ENST00000575289 768 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AL031274.2-201ENST00000599419 203 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AL357094.1-201ENST00000603845 844 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AL450336.1-201ENST00000605180 586 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC005332.6-201ENST00000613178 446 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 AC079416.3-201ENST00000624479 549 ntBASIC1.09□□□□□ -2.23
KIAA1549Q9HCM3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
KIAA1549Q9HCM3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
KIAA1549Q9HCM3 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.09□□□□□ -2.24
KIAA1549Q9HCM3 RNU1-62P-201ENST00000362599 164 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-203P-201ENST00000384038 104 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 MIR217-201ENST00000384817 110 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 MIR29C-201ENST00000385231 88 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 DEFB130D-201ENST00000426866 237 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 SNRPEP9-201ENST00000436794 238 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 TOMM22P6-201ENST00000465035 409 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 RPL36AP48-201ENST00000485521 314 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 ATP5EP1-201ENST00000510257 156 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 SMURF2P1-201ENST00000514992 481 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AL354943.1-201ENST00000572103 781 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 BNIP3P25-201ENST00000596023 559 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AL713866.2-201ENST00000603579 219 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC092953.2-201ENST00000608000 699 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC010133.1-201ENST00000615809 842 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AL390862.1-201ENST00000635467 1469 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 MIR126-201ENST00000362291 85 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-432P-201ENST00000384196 109 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 MTND4P6-201ENST00000438297 472 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC244505.5-201ENST00000443639 207 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 HSPE1P24-201ENST00000450782 238 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 RNU7-140P-201ENST00000459546 60 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AL160314.1-201ENST00000490836 438 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 RPL22P13-201ENST00000493291 347 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 LINC00557-201ENST00000563184 1279 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 MTCYBP22-201ENST00000603788 447 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AL773524.1-201ENST00000614065 229 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 AC009268.2-201ENST00000621925 457 ntBASIC1.08□□□□□ -2.24
KIAA1549Q9HCM3 Y_RNA.245-201ENST00000364493 95 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 SUGT1P1-201ENST00000379514 476 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 SNORD26-201ENST00000384147 75 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-19P-201ENST00000384718 107 ntBASIC1.07□□□□□ -2.24
KIAA1549Q9HCM3 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms