Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC068657.1-201ENST00000520807 306 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 FO082796.1-201ENST00000523795 183 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 OR5AQ1P-201ENST00000527596 927 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC011611.1-201ENST00000552179 197 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 HIF1AP1-201ENST00000553642 175 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AL162413.1-201ENST00000603198 110 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AL162713.1-201ENST00000604480 262 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 UCA1.1-201ENST00000620952 75 ntBASIC3.08□□□□□ -1.92
BRF2Q9HAW0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
BRF2Q9HAW0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC004972.1-201ENST00000623934 2209 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 Y_RNA.402-201ENST00000383972 102 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 RNU6-750P-201ENST00000390946 107 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 MIR548F1-201ENST00000408667 84 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 Y_RNA.599-201ENST00000410489 109 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AL353678.1-201ENST00000422735 741 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 RPS3AP44-201ENST00000425466 790 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 TOMM20P4-201ENST00000427861 435 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 C8orf59P1-201ENST00000429930 303 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AL353705.1-201ENST00000433468 480 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AL358232.1-201ENST00000448030 501 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 RPL21P10-201ENST00000463521 490 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 FAM133DP-201ENST00000464802 691 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC008716.1-201ENST00000511084 513 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC109635.3-201ENST00000529536 185 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AK6P1-201ENST00000540219 478 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AL157687.1-201ENST00000554853 619 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC008739.2-201ENST00000597006 317 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC004832.5-201ENST00000608677 401 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC090517.2-201ENST00000614966 680 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 U6atac.1-201ENST00000616025 117 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 MTND4P5-201ENST00000435821 1374 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 FAM35CP-201ENST00000554755 2470 ntBASIC3.07□□□□□ -1.92
BRF2Q9HAW0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BRF2Q9HAW0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 RNU6-715P-201ENST00000365204 103 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 Y_RNA.573-201ENST00000384763 105 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 MIR449B-201ENST00000384995 97 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 MIR34A-201ENST00000385130 110 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 SNORD115-47-201ENST00000391226 86 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 RNU2-49P-201ENST00000410666 184 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC023141.4-201ENST00000412031 328 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 EIF1P1-201ENST00000421436 341 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 MTCO1P20-201ENST00000425366 358 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC009414.1-201ENST00000427200 443 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AL159987.2-201ENST00000432754 307 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC000111.3-201ENST00000433478 193 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.06□□□□□ -1.92
BRF2Q9HAW0 CYCSP35-201ENST00000451978 304 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 ASNSP3-201ENST00000451989 1306 ntBASIC3.06□□□□□ -1.92
BRF2Q9HAW0 NIPA2P5-201ENST00000452282 464 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms