Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 RNU6-140P-201ENST00000384566 108 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AL122016.1-201ENST00000403365 367 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 FAT1P1-201ENST00000406588 507 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AL591034.1-201ENST00000407447 340 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 RNA5SP44-201ENST00000410446 133 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 SNRPEP9-201ENST00000436794 238 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 RNA5SP310-201ENST00000459084 116 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AC022493.1-201ENST00000492984 337 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 MTND3P25-201ENST00000509243 135 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 SNORA70.14-201ENST00000516205 110 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AC105029.1-201ENST00000520250 669 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 RPS3AP23-202ENST00000574601 686 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AC135507.2-201ENST00000612443 309 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 RNVU1-4-201ENST00000612985 164 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 RMST_7.1-201ENST00000621935 268 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 CUL1P1-201ENST00000509510 2425 ntBASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDCP1Q9H5V8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 FAM35BP-202ENST00000497389 3337 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 MIR208A-201ENST00000362287 71 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 RNA5SP50-201ENST00000363731 107 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 Y_RNA.184-201ENST00000363884 108 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 SNORA75B-201ENST00000384053 137 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 MIR183-201ENST00000384958 110 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 RN7SKP53-201ENST00000411337 315 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 NCOR1P3-201ENST00000420479 303 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AC017083.1-201ENST00000428093 483 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AC087884.1-201ENST00000469738 328 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 HMGB1P30-201ENST00000492455 606 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AC079140.5-201ENST00000507882 310 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 Y_RNA.675-201ENST00000516389 149 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 RNU6-273P-201ENST00000516937 96 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 CYCSP27-201ENST00000527643 293 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AP000889.2-201ENST00000532684 490 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 MIR4795-201ENST00000584182 89 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 MIR3942-201ENST00000585264 109 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 MIR7851-201ENST00000610611 160 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AC099506.2-201ENST00000623074 221 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 AF117829.1-206ENST00000621883 3802 ntBASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
CDCP1Q9H5V8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AC022336.2-201ENST00000568966 2538 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AC007656.2-201ENST00000624902 4547 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 RNU6-254P-201ENST00000363377 107 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 RNU6-266P-201ENST00000364225 107 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 SNORA70.4-201ENST00000365509 134 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 RNU6-217P-201ENST00000384164 104 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AL353621.1-201ENST00000418219 243 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 ANP32BP2-201ENST00000454525 545 ntBASIC3.3□□□□□ -1.88
CDCP1Q9H5V8 snoU13.22-201ENST00000459428 104 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms