Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
EBF3Q9H4W6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 SNORA62.1-201ENST00000364287 154 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 MIR558-201ENST00000384920 94 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 RNU6-278P-201ENST00000390945 109 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 RNU6-754P-201ENST00000391166 107 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AL592114.1-201ENST00000403842 483 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 SNORA11.2-201ENST00000408318 127 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 MIR548F5-201ENST00000408421 86 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 RNA5SP107-201ENST00000411358 122 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 BEND7P1-201ENST00000422058 457 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC020550.1-201ENST00000447385 163 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 RNU7-180P-201ENST00000459240 63 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC092451.1-201ENST00000480211 153 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC083904.1-201ENST00000487828 231 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 CCDC34P1-201ENST00000507441 517 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.682-201ENST00000516457 100 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 RNU6-798P-201ENST00000516912 103 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC109635.4-202ENST00000531666 412 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC005476.1-201ENST00000554427 397 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 MIR5583-1-201ENST00000580941 59 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC100830.2-201ENST00000581636 240 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 BNIP3P25-201ENST00000596023 559 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC006254.3-201ENST00000603353 884 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AP001330.4-201ENST00000604350 154 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AL031176.1-201ENST00000604554 466 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AL132822.1-201ENST00000617063 513 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC022149.2-201ENST00000621061 203 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 7SK.10-201ENST00000621414 298 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 uc_338.22-201ENST00000622722 187 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 AC244517.12-201ENST00000623581 663 ntBASIC3.44□□□□□ -1.86
EBF3Q9H4W6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
EBF3Q9H4W6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 GABPAP-201ENST00000419271 1356 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AP001148.1-201ENST00000624124 2359 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 HSPE1P11-201ENST00000339579 310 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 RNU6-1309P-201ENST00000363305 108 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 RNU6-511P-201ENST00000363496 107 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 MIR548K-201ENST00000408406 116 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AC092447.6-201ENST00000414578 210 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 RPL23AP22-201ENST00000437556 453 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AC016696.1-201ENST00000446949 318 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AL162395.1-201ENST00000457882 422 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 RPL23AP62-201ENST00000463396 453 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 SNRPGP3-201ENST00000469405 227 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AC068657.1-201ENST00000520807 306 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AL133271.1-201ENST00000538229 291 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AC004024.1-201ENST00000549244 247 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 AL022345.1-201ENST00000607292 135 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 U73479.1-201ENST00000618062 168 ntBASIC3.43□□□□□ -1.86
EBF3Q9H4W6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
EBF3Q9H4W6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.197-201ENST00000364004 102 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.378-201ENST00000365652 113 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 Y_RNA.414-201ENST00000384011 101 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 RNU6-637P-201ENST00000384050 107 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
EBF3Q9H4W6 RNU2-39P-201ENST00000410604 198 ntBASIC3.42□□□□□ -1.86
EBF3Q9H4W6 RNU6-516P-201ENST00000411381 104 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms