Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC8.88□□□□□ -0.99
SENP3Q9H4L4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC8.88□□□□□ -0.99
SENP3Q9H4L4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SENP3Q9H4L4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 ZNF271P-202ENST00000465539 1970 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 RNU6-624P-201ENST00000363411 107 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 RNU6-1307P-201ENST00000391012 103 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 MIR1204-201ENST00000408388 67 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 AL590762.4-201ENST00000425885 253 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 SCGB1D5P-201ENST00000515134 247 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 AC078899.2-201ENST00000595282 212 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 AL359195.2-201ENST00000623657 4412 ntBASIC8.87□□□□□ -0.99
SENP3Q9H4L4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SENP3Q9H4L4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 AC241584.2-201ENST00000637142 2090 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 RNA5SP375-201ENST00000362975 119 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 SNORD115-39-201ENST00000363694 82 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 RNA5SP132-201ENST00000364725 118 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 U8.11-201ENST00000384699 133 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 RNU6-613P-201ENST00000410412 108 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 U8.18-201ENST00000459285 133 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 Y_RNA.681-201ENST00000516445 113 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC8.86□□□□□ -0.99
SENP3Q9H4L4 AC010624.4-201ENST00000597606 1351 ntBASIC8.86□□□□□ -0.99
SENP3Q9H4L4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 AC020658.2-201ENST00000559030 4020 ntBASIC8.85□□□□□ -0.99
SENP3Q9H4L4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 MAPK10-304ENST00000641341 3984 ntBASIC8.85□□□□□ -0.99
SENP3Q9H4L4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 RNU1-150P-201ENST00000362491 162 ntBASIC8.85□□□□□ -0.99
SENP3Q9H4L4 MIR300-201ENST00000401138 83 ntBASIC8.85□□□□□ -0.99
SENP3Q9H4L4 REG1CP-206ENST00000447469 496 ntBASIC8.85□□□□□ -0.99
SENP3Q9H4L4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 SEPT14P17-201ENST00000617978 177 ntBASIC8.85□□□□□ -0.99
SENP3Q9H4L4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 OR13C1P-202ENST00000641378 2919 ntBASIC8.85□□□□□ -0.99
SENP3Q9H4L4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.85□□□□□ -0.99
SENP3Q9H4L4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 RNU6-686P-201ENST00000364839 107 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 RNU6-146P-201ENST00000384602 108 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 AC016717.1-201ENST00000448918 286 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 RNU6-941P-201ENST00000516346 108 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 RNU7-25P-201ENST00000516544 62 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 IGLV3-30-201ENST00000524362 298 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 MIR6820-201ENST00000611508 62 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 MIR6793-201ENST00000612376 63 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SENP3Q9H4L4 AC092111.1-201ENST00000618256 3358 ntBASIC8.84□□□□□ -0.99
SENP3Q9H4L4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.84□□□□□ -1
SENP3Q9H4L4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SENP3Q9H4L4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 254.6 ms