Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 USP9YP20-201ENST00000419224 558 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AL109913.1-201ENST00000421173 514 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 RPL23AP30-201ENST00000432419 501 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AL591704.1-201ENST00000432574 275 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 MTATP6P16-201ENST00000434543 526 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 RPL36AP6-201ENST00000435770 321 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 MRPL50P4-201ENST00000446432 475 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 RPL26P9-201ENST00000457466 433 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC109927.2-201ENST00000506416 303 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 RNU6-914P-201ENST00000516749 109 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 RNU6-826P-201ENST00000516827 104 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AP003122.3-201ENST00000526316 255 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC084851.1-201ENST00000529105 249 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC012213.3-201ENST00000577199 777 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 MIR3162-201ENST00000581818 82 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 NBR2-204ENST00000587322 63 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC245014.2-201ENST00000603689 287 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC246785.4-201ENST00000605374 287 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC006566.1-201ENST00000608943 513 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AL161734.1-201ENST00000609720 557 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC109347.2-201ENST00000610220 349 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC008498.1-201ENST00000613012 531 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 AC004852.3-201ENST00000614131 326 ntBASIC2.78□□□□□ -1.96
SNX25Q9H3E2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SNX25Q9H3E2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 RNU6-282P-201ENST00000365357 103 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 Y_RNA.359-201ENST00000365498 102 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 UBE2V1P2-201ENST00000397758 440 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 PIGFP2-201ENST00000421400 651 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 RPL23AP58-201ENST00000440453 469 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC011816.1-201ENST00000441346 546 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 MTCO2P18-201ENST00000457151 658 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 SNORA59A-201ENST00000459326 152 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 RPS29P12-201ENST00000460178 152 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 KLF3P2-201ENST00000465138 268 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC126182.1-201ENST00000478134 357 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 RN7SL297P-201ENST00000483161 293 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 RNA5SP282-201ENST00000516355 108 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC009902.1-201ENST00000519351 183 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC008739.2-201ENST00000597006 317 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC080013.6-201ENST00000606185 215 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 MIR98-201ENST00000606724 119 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 MIR15A-201ENST00000607334 83 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC245008.1-201ENST00000608123 476 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC097065.2-201ENST00000608159 533 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC009090.3-201ENST00000616553 565 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AC068880.5-201ENST00000624331 290 ntBASIC2.77□□□□□ -1.97
SNX25Q9H3E2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX25Q9H3E2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX25Q9H3E2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNX25Q9H3E2 SNORD56.5-201ENST00000364281 72 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 RNA5SP139-201ENST00000364340 117 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 RNU6-641P-201ENST00000384006 107 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 RNU6-190P-201ENST00000384154 102 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 RNU6-74P-201ENST00000384235 107 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 NDUFS5P4-201ENST00000412983 318 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX25Q9H3E2 Z96811.1-201ENST00000445880 108 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 FABP5P13-201ENST00000452144 328 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AL122001.1-201ENST00000457027 370 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 TPT1P7-201ENST00000458300 517 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AC126389.1-201ENST00000477436 290 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 RPL9P33-201ENST00000484311 566 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 MTND4P2-201ENST00000507767 1203 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AC117522.1-201ENST00000509821 380 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AC108078.2-201ENST00000510750 236 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 RNU6-430P-201ENST00000517078 107 ntBASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX25Q9H3E2 AC007938.3-201ENST00000604965 623 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 321 ms