Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU6-6P-201ENST00000606623 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC002076.2-201ENST00000617362 122 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 SNORD62.1-201ENST00000362541 86 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 RNU6-1035P-201ENST00000384477 107 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 RNY4P36-201ENST00000391116 96 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AL096701.2-201ENST00000416920 238 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 MRPS31P2-201ENST00000451581 518 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 CEACAMP4-201ENST00000457676 421 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AC116337.1-201ENST00000509680 687 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 RNU6-928P-201ENST00000516876 104 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 APOOP3-201ENST00000536787 586 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 CYCSP30-201ENST00000546447 172 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AC011602.1-201ENST00000546484 331 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AL442663.2-201ENST00000554385 511 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AC034105.4-201ENST00000568304 277 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 ELOCP5-201ENST00000604924 333 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 MIR6076-201ENST00000617521 113 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 AC090971.5-201ENST00000621102 293 ntBASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC113Q9H0I3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RNU6-884P-201ENST00000363889 107 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RNA5SP97-201ENST00000365006 84 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 MIR30B-201ENST00000384850 88 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 Y_RNA.579-201ENST00000390939 94 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC245054.2-201ENST00000415639 319 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC016831.2-201ENST00000417179 352 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AL353729.1-201ENST00000425044 720 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC093151.1-201ENST00000427711 313 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC005534.2-201ENST00000431047 433 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AL445584.1-201ENST00000431451 330 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RPL37P4-201ENST00000448908 268 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AL031274.1-201ENST00000450334 232 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RPL30P15-201ENST00000457129 321 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 Y_RNA.653-201ENST00000459091 95 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RPL21P11-201ENST00000461458 483 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RN7SL542P-201ENST00000467147 294 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RN7SL132P-201ENST00000478131 296 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 HMGN1P11-201ENST00000508668 303 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 RNU6-1016P-201ENST00000516689 94 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC107016.1-201ENST00000550463 337 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 HMGB1P14-201ENST00000557424 591 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC008121.1-201ENST00000603244 268 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC019193.3-201ENST00000609144 554 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC133104.2-201ENST00000615272 193 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC073308.1-201ENST00000623696 305 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AC099654.10-201ENST00000640395 161 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 MAPK10-372ENST00000641954 3413 ntBASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CCDC113Q9H0I3 AF127577.6-201ENST00000623352 2191 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 RNU1-89P-201ENST00000384592 164 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 RPL5P18-201ENST00000406671 891 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 snoU109.2-201ENST00000459316 135 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 RPL23AP62-201ENST00000463396 453 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 RPL30P14-201ENST00000482744 348 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 AC018437.1-201ENST00000492214 406 ntBASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC113Q9H0I3 MIR3609-201ENST00000582661 80 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms