Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RNU6-817P-201ENST00000391083 104 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RN7SKP158-201ENST00000410453 326 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RNU2-62P-201ENST00000410868 191 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RPL23AP39-201ENST00000415533 405 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 KLF3P2-201ENST00000465138 268 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RPL39P36-201ENST00000490784 156 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 CKS1BP2-201ENST00000497342 240 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RPS3AP4-201ENST00000555161 764 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC009127.3-201ENST00000570531 403 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RPS3AP23-202ENST00000574601 686 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 NRBF2P1-201ENST00000587407 859 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 RPS15AP11-201ENST00000594193 385 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AL589994.2-201ENST00000621124 579 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AL356266.1-201ENST00000623311 483 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC017037.3-201ENST00000625016 472 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC104454.1-201ENST00000421341 1401 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 AC007336.1-201ENST00000576365 3828 ntBASIC2.32□□□□□ -2.04
POLR1EQ9GZS1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 MIR449A-201ENST00000362113 91 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 RNU6-809P-201ENST00000384461 107 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 RNU6-14P-201ENST00000384630 106 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 RNU6-748P-201ENST00000384648 107 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 RPS27AP14-201ENST00000422868 454 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AC010099.3-201ENST00000423896 409 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 RPL37P21-201ENST00000435890 276 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AC068587.2-201ENST00000478386 781 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 RPL36AP48-201ENST00000485521 314 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AC087241.2-201ENST00000535801 324 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AL512310.1-201ENST00000548639 172 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 MIR3146-201ENST00000580367 79 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AC023510.2-201ENST00000622162 746 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 AL512643.1-201ENST00000635735 524 ntBASIC2.31□□□□□ -2.04
POLR1EQ9GZS1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 RNU6-500P-201ENST00000362349 107 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 RNU1-91P-201ENST00000364746 163 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 RNY3P13-201ENST00000365542 102 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 XGY1-201ENST00000381172 446 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AL591416.1-201ENST00000404015 867 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 RNU2-63P-201ENST00000410792 194 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 RNU4-53P-201ENST00000410828 140 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 NPM1P11-201ENST00000417106 855 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC003685.2-201ENST00000422795 395 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC018634.1-201ENST00000437554 401 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 BRK1P2-201ENST00000442875 223 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 MTND5P2-201ENST00000442927 1142 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC124916.1-201ENST00000444020 547 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 RPL7P12-201ENST00000446719 750 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 SNORD97-201ENST00000459187 142 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 SNORA59A-201ENST00000459326 152 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 RNU6-678P-201ENST00000516832 109 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AP002770.2-201ENST00000543613 532 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC009094.1-201ENST00000564443 426 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC104763.2-201ENST00000604179 382 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC007363.1-201ENST00000604736 620 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AP000860.1-201ENST00000605250 559 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 AC012640.5-201ENST00000623897 319 ntBASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.3□□□□□ -2.04
POLR1EQ9GZS1 Z75746.1-201ENST00000440243 2080 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms