Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RPL23AP94-201ENST00000512518 302 ntBASIC4.7□□□□□ -1.66
CNTNAP4Q9C0A0 AC025423.5-201ENST00000550230 219 ntBASIC4.7□□□□□ -1.66
CNTNAP4Q9C0A0 MIR5692A1-201ENST00000580523 69 ntBASIC4.7□□□□□ -1.66
CNTNAP4Q9C0A0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CNTNAP4Q9C0A0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTNAP4Q9C0A0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC058791.1-201ENST00000608412 3198 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 MFSD8-236ENST00000641509 4050 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 Y_RNA.117-201ENST00000363294 101 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 SNORA23-201ENST00000365128 182 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 RPS4XP7-201ENST00000406274 780 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 RPS26P47-201ENST00000427219 348 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC005300.1-201ENST00000428401 373 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 PSMA2P3-201ENST00000429685 675 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AL353752.1-201ENST00000454946 260 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-390P-201ENST00000516259 103 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 ERHP1-201ENST00000523006 310 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 OR5D17P-201ENST00000531492 978 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC090877.1-201ENST00000561418 344 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 MIR3910-1-201ENST00000580936 111 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC067852.3-201ENST00000589177 561 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 YPEL5P2-201ENST00000605553 359 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AL591516.1-201ENST00000611326 274 ntBASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CNTNAP4Q9C0A0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 AC007685.1-201ENST00000329806 452 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 Y_RNA.210-201ENST00000364161 110 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 Y_RNA.350-201ENST00000365409 98 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-1329P-201ENST00000365664 107 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-842P-201ENST00000384269 107 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-306P-201ENST00000384617 107 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 AL160275.3-201ENST00000423876 471 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 RPS15AP10-201ENST00000432472 382 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 DYNLT3P2-201ENST00000442517 295 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 AC022795.1-201ENST00000473808 480 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 GZMAP1-201ENST00000503054 631 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 AC022447.4-201ENST00000504053 364 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 PPBPP1-201ENST00000510807 373 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 MTND1P19-201ENST00000511780 315 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 SNORA70.18-201ENST00000516696 98 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 Y_RNA.715-201ENST00000517082 110 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 AC125232.2-201ENST00000592457 143 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 AC012119.1-201ENST00000603184 222 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 MIR8057-201ENST00000620957 69 ntBASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.68□□□□□ -1.66
CNTNAP4Q9C0A0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 Y_RNA.106-201ENST00000363189 100 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-770P-201ENST00000363929 105 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-371P-201ENST00000364283 108 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-450P-201ENST00000364654 107 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 Y_RNA.485-201ENST00000384395 102 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 SNORA48.2-201ENST00000390926 124 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 RPL21P1-201ENST00000399532 476 ntBASIC4.67□□□□□ -1.66
CNTNAP4Q9C0A0 AL139039.1-201ENST00000401900 692 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms