Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 AC093677.1-201ENST00000514414 678 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 AC107953.1-201ENST00000522216 297 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 AC084851.1-201ENST00000529105 249 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 SEPT7P9-203ENST00000604116 343 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 AC024257.5-201ENST00000612739 531 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 AC084824.4-201ENST00000620106 731 ntBASIC1.53□□□□□ -2.16
TRIM4Q9C037 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM4Q9C037 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM4Q9C037 AL359854.1-201ENST00000614203 1594 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 RNU6-486P-201ENST00000363116 107 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.52□□□□□ -2.17
TRIM4Q9C037 SUGT1P1-201ENST00000379514 476 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 SNRPEP2-201ENST00000397592 279 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AL158050.1-201ENST00000416077 457 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM4Q9C037 TRIM60P13-201ENST00000432350 1283 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM4Q9C037 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.52□□□□□ -2.17
TRIM4Q9C037 MTND4LP16-201ENST00000440828 295 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AL691517.1-201ENST00000440833 1235 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AC244505.3-201ENST00000454598 187 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 USP9YP10-201ENST00000454868 628 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AC021146.2-201ENST00000504736 556 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 MRPS33P3-201ENST00000513456 322 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 RNA5SP137-201ENST00000516833 135 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AL137100.2-201ENST00000555786 315 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.52□□□□□ -2.17
TRIM4Q9C037 AC233702.2-202ENST00000562547 291 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 MIR4666A-201ENST00000580160 79 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AC002545.1-201ENST00000592511 181 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AC011451.2-201ENST00000604303 598 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 RMST_6.1-201ENST00000611980 203 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 HPVC1-201ENST00000629899 1198 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM4Q9C037 CDC27P3-201ENST00000635418 1910 ntBASIC1.52□□□□□ -2.17
TRIM4Q9C037 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRIM4Q9C037 AL161722.3-201ENST00000605789 2983 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 RNU6-37P-201ENST00000362692 107 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 RNU6-11P-201ENST00000364234 107 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 RNU6-53P-201ENST00000365367 106 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 RNU6-932P-201ENST00000391108 106 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.51□□□□□ -2.17
TRIM4Q9C037 MTCYBP32-201ENST00000427945 1084 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 GXYLT1P1-201ENST00000446657 490 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.51□□□□□ -2.17
TRIM4Q9C037 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.51□□□□□ -2.17
TRIM4Q9C037 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.51□□□□□ -2.17
TRIM4Q9C037 AL138478.1-201ENST00000612252 832 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 AC002550.2-201ENST00000621246 394 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 U2.21-201ENST00000637295 81 ntBASIC1.51□□□□□ -2.17
TRIM4Q9C037 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TRIM4Q9C037 MIR96-201ENST00000362288 78 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 RNU6-778P-201ENST00000363269 103 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 RNU6-342P-201ENST00000384521 104 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 MIR598-201ENST00000384868 97 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 MCTS2P-201ENST00000394552 546 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 RNU2-63P-201ENST00000410792 194 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 AC244636.1-201ENST00000421152 228 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 SNRPEP9-201ENST00000436794 238 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 MTND2P29-201ENST00000438595 412 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM4Q9C037 RPL39P6-201ENST00000448289 150 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM4Q9C037 RNA5SP112-201ENST00000515937 99 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 SNORD19.2-201ENST00000516978 73 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 SNORA76.2-201ENST00000517095 137 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 AP004607.1-201ENST00000524456 203 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM4Q9C037 NACAP3-201ENST00000552100 481 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 AL161670.1-201ENST00000554348 137 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 AC008269.2-201ENST00000561915 1105 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 AL031274.2-201ENST00000599419 203 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM4Q9C037 KATNBL1P5-201ENST00000605015 517 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM4Q9C037 uc_338.14-201ENST00000613162 166 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM4Q9C037 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM4Q9C037 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.5□□□□□ -2.17
TRIM4Q9C037 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
TRIM4Q9C037 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM4Q9C037 ZNF876P-202ENST00000398732 1485 ntBASIC1.5□□□□□ -2.17
TRIM4Q9C037 Y_RNA.30-201ENST00000362572 97 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 RNU6-516P-201ENST00000411381 104 ntBASIC1.49□□□□□ -2.17
TRIM4Q9C037 RPS24P7-201ENST00000416921 246 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms