Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC120349.2-201ENST00000625002 298 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 RNU6-223P-201ENST00000362830 107 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 Y_RNA.234-201ENST00000364409 97 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 RNA5SP240-201ENST00000365355 128 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 SNORA40.19-201ENST00000390846 128 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 DHFRP6-201ENST00000401776 268 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 PGBD4P6-201ENST00000421501 610 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AL158053.1-201ENST00000441503 453 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC009238.1-201ENST00000442165 424 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC009237.6-201ENST00000446969 424 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC002381.1-201ENST00000447049 280 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 HMGN2P10-201ENST00000448085 265 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 ARPC3P5-201ENST00000448802 534 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC005410.1-202ENST00000460347 485 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 RPL7P18-201ENST00000478965 734 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 ATP5EP1-201ENST00000510257 156 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AL731537.2-201ENST00000561565 951 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 SEPT7P9-203ENST00000604116 343 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC091152.3-201ENST00000604227 325 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC011939.3-201ENST00000613686 466 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC010133.1-201ENST00000615809 842 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 RMST_2.1-201ENST00000617263 136 ntBASIC1.83□□□□□ -2.12
UPF3BQ9BZI7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 RNU6-609P-201ENST00000365459 107 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 HMGN2P39-201ENST00000398005 273 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AL158823.1-201ENST00000418441 478 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AL139421.1-201ENST00000423010 169 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 MTND4P6-201ENST00000438297 472 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AMD1P1-201ENST00000457220 922 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 HMGN1P7-201ENST00000491722 313 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AC018437.1-201ENST00000492214 406 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AP005435.4-201ENST00000529514 284 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AC006199.1-201ENST00000548728 219 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 LINC00933-203ENST00000559812 219 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AC069304.2-201ENST00000605154 435 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AC009233.1-201ENST00000616477 371 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AL445264.1-201ENST00000621719 171 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 AC109454.4-201ENST00000623411 649 ntBASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UPF3BQ9BZI7 SNORD114-26-201ENST00000363543 72 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 AL590084.2-201ENST00000401481 382 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 TPMTP2-201ENST00000414372 726 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 AL445669.1-201ENST00000426743 755 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 HMGB1P31-201ENST00000437242 427 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 MTCO3P43-201ENST00000440974 771 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 RPL22P13-201ENST00000493291 347 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 RNU6-714P-201ENST00000516963 103 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 RNA5SP290-201ENST00000517133 127 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 MIR4299-201ENST00000577899 72 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 AL355598.1-201ENST00000604169 202 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 AC004805.2-201ENST00000605382 482 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 MIR5739-201ENST00000619803 80 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 MTND5P10-201ENST00000603719 1809 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 ZNF702P-202ENST00000434269 1966 ntBASIC1.81□□□□□ -2.12
UPF3BQ9BZI7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 SNORA7.1-201ENST00000363750 139 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 RNU4-42P-201ENST00000364738 142 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 Y_RNA.548-201ENST00000384656 105 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 MIR95-201ENST00000385072 81 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 TXNP7-201ENST00000406296 293 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 MIR1304-201ENST00000408243 91 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 AL161449.1-201ENST00000414531 1199 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 RPS4XP11-201ENST00000446897 772 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 CYP2C59P-201ENST00000457790 269 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 RNU1-123P-201ENST00000458950 160 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 RNU6-927P-201ENST00000516199 100 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 AC107982.1-201ENST00000507171 1300 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 MTND5P35-201ENST00000557537 1720 ntBASIC1.8□□□□□ -2.12
UPF3BQ9BZI7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms