Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 TAS2R15P-201ENST00000390674 928 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 RNU6-750P-201ENST00000390946 107 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 ZNF876P-202ENST00000398732 1485 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AL359634.1-202ENST00000404721 284 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AL445687.1-201ENST00000439946 251 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 HSPE1P23-201ENST00000509838 286 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 RNU6-64P-201ENST00000517119 105 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AP000907.2-201ENST00000530827 353 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AP000403.1-201ENST00000603349 851 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC092106.3-201ENST00000611308 722 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC244517.12-201ENST00000623581 663 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC091965.5-201ENST00000624785 342 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 U2.21-201ENST00000637295 81 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 MIR513B-201ENST00000385136 84 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC019129.1-201ENST00000403786 261 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 U3.40-201ENST00000408706 208 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 VPS26BP1-201ENST00000417155 755 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 SKA2P1-201ENST00000425592 390 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC027124.2-201ENST00000428249 105 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 RPS27AP10-201ENST00000496103 208 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 EIF4EP3-201ENST00000498782 656 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 RNU1-40P-201ENST00000516816 164 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 RNU1-97P-201ENST00000516872 164 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 FAM92A1P1-201ENST00000528023 890 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 MIR4293-201ENST00000584305 78 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AL450336.1-201ENST00000605180 586 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 AL355472.4-201ENST00000610233 626 ntBASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RPAP1Q9BWH6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 RNU6-778P-201ENST00000363269 103 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 NDUFS5P4-201ENST00000412983 318 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 MED14P1-201ENST00000430517 648 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 Z80107.1-201ENST00000436830 412 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 LARP1BP3-201ENST00000437229 869 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 MTAPP1-201ENST00000489154 819 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 RPF2P2-201ENST00000504693 896 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 RNU6-311P-201ENST00000516224 102 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 RNA5SP165-201ENST00000517142 115 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 DEFB108A-201ENST00000530110 222 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 MIR3935-201ENST00000583472 104 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AL161798.1-201ENST00000604630 131 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AL607023.1-201ENST00000620045 248 ntBASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP1Q9BWH6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 MTND1P20-201ENST00000430341 950 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 OSTCP8-201ENST00000445117 448 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 FABP5P13-201ENST00000452144 328 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC233279.1-201ENST00000455300 423 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC132942.1-201ENST00000486753 483 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC098591.2-201ENST00000510152 315 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 NACAP3-201ENST00000552100 481 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC023043.2-201ENST00000589678 1026 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC245884.10-201ENST00000597355 337 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC091965.4-201ENST00000607691 587 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 MIR7111-201ENST00000619751 72 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC022960.3-201ENST00000619794 441 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC079416.3-201ENST00000624479 549 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 AC110491.1-201ENST00000562191 2010 ntBASIC2.34□□□□□ -2.04
RPAP1Q9BWH6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms