Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 RNA5SP36-201ENST00000410197 133 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 EIF4EP2-201ENST00000422816 654 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 RPS12P10-201ENST00000427031 377 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 RPS3AP46-201ENST00000448352 682 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 RN7SL41P-201ENST00000476144 297 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC108022.1-201ENST00000493466 478 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC022493.2-201ENST00000506122 481 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 RNA5SP384-201ENST00000516615 116 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC007991.1-201ENST00000522680 631 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AP003730.1-201ENST00000524605 285 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC023442.1-201ENST00000531247 422 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 TRAV8-5-201ENST00000537369 341 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC091979.2-201ENST00000607514 214 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AL391261.4-201ENST00000616012 481 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC068724.3-201ENST00000625906 87 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 U6.98-201ENST00000637157 84 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 AC011266.1-201ENST00000624119 3569 ntBASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
TRAIPQ9BWF2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 SNORA70C-201ENST00000384538 135 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 MIR147B-201ENST00000390185 80 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 RNU1-101P-201ENST00000391171 127 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 PTMAP5-201ENST00000393073 333 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 HDGFP1-201ENST00000405943 252 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AC096664.2-201ENST00000411843 406 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 RPL23AP26-201ENST00000412728 464 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 Y_RNA.661-201ENST00000516003 99 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 RNU6-988P-201ENST00000519081 107 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 MIR3171-201ENST00000584270 74 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AL355877.2-201ENST00000603670 358 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 AC020634.1-201ENST00000608701 549 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 RMST_9.1-201ENST00000619945 193 ntBASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAIPQ9BWF2 HAUS6P2-201ENST00000433254 2404 ntBASIC4.84□□□□□ -1.64
TRAIPQ9BWF2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.84□□□□□ -1.64
TRAIPQ9BWF2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TRAIPQ9BWF2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRAIPQ9BWF2 AC009541.1-201ENST00000438279 2662 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC006504.1-201ENST00000562493 3666 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 RNU1-132P-201ENST00000364300 164 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 Y_RNA.395-201ENST00000383945 109 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 MIR1183-201ENST00000408856 89 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 RNA5SP146-201ENST00000410743 123 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 RNU6-55P-201ENST00000411092 107 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC023141.4-201ENST00000412031 328 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 BX276092.3-201ENST00000424182 230 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC011816.1-201ENST00000441346 546 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 UQCRHP4-201ENST00000471686 272 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC025884.1-201ENST00000556034 378 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 RPL7P50-201ENST00000600588 727 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC025946.2-201ENST00000603398 234 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC241585.2-209ENST00000638217 143 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 AC091152.2-201ENST00000591628 2569 ntBASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAIPQ9BWF2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
TRAIPQ9BWF2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
TRAIPQ9BWF2 SNORA14A-201ENST00000364773 135 ntBASIC4.82□□□□□ -1.64
TRAIPQ9BWF2 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.82□□□□□ -1.64
TRAIPQ9BWF2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRAIPQ9BWF2 RNA5SP44-201ENST00000410446 133 ntBASIC4.82□□□□□ -1.64
TRAIPQ9BWF2 AP000275.1-201ENST00000411943 390 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms