Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AC008269.2-201ENST00000561915 1105 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AC006006.1-201ENST00000603082 144 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 ELOCP5-201ENST00000604924 333 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL162373.1-201ENST00000620433 407 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL031601.2-202ENST00000622650 282 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 CR392039.5-201ENST00000623201 510 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL773545.4-201ENST00000637262 310 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL513478.4-201ENST00000641636 310 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 RNU6-1329P-201ENST00000365664 107 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 SNORA3.3-201ENST00000408712 125 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 RNU6-293P-201ENST00000411259 106 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 Z85995.1-201ENST00000415547 335 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 CYP4F29P-201ENST00000420685 446 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC008267.5-201ENST00000424928 265 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 UBE2V1P4-201ENST00000425374 344 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC006946.1-201ENST00000429106 328 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 HMGB1P9-201ENST00000429856 646 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC097713.2-201ENST00000430199 356 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC087650.1-201ENST00000431445 468 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL645568.3-201ENST00000433683 316 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 GOT2P5-201ENST00000433995 546 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 HMGB1P37-201ENST00000439613 609 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL356535.1-201ENST00000440335 398 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL358232.1-201ENST00000448030 501 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL645939.1-201ENST00000453429 797 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 S100A11P1-201ENST00000477525 312 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 RPL31P13-201ENST00000484151 370 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC022493.2-201ENST00000506122 481 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC005921.1-201ENST00000510589 286 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC008716.1-201ENST00000511084 513 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC023141.12-201ENST00000512399 199 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 MTCO2P24-201ENST00000515611 426 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 SNORA70.16-201ENST00000516390 95 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 YPEL5P3-201ENST00000547227 352 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC004024.1-201ENST00000549244 247 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC107016.1-201ENST00000550463 337 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL157871.3-201ENST00000557231 293 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AL360157.1-201ENST00000565962 87 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 MIR1273C-201ENST00000578669 77 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 MIR4444-1-201ENST00000581696 74 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 MIR4444-2-201ENST00000584390 74 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 MIR3149-201ENST00000584629 83 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 NUTF2P8-201ENST00000604593 363 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 RNU6-85P-201ENST00000605989 107 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC005344.1-201ENST00000613391 459 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC119674.1-207ENST00000641355 633 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.72□□□□□ -1.81
NDC1Q9BTX1 CDC27P3-201ENST00000635418 1910 ntBASIC3.72□□□□□ -1.81
NDC1Q9BTX1 AC010733.2-201ENST00000589496 5702 ntBASIC3.71□□□□□ -1.81
NDC1Q9BTX1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
NDC1Q9BTX1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.151-201ENST00000363566 112 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 RNA5SP189-201ENST00000364920 115 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 RNA5SP167-201ENST00000365461 116 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 RNU6-395P-201ENST00000365662 106 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.557-201ENST00000384680 107 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 MIR30B-201ENST00000384850 88 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 MIR708-201ENST00000390708 88 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 HMGB3P2-201ENST00000411913 584 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 RPS24P13-201ENST00000442520 397 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 HMGB1P30-201ENST00000492455 606 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 RNA5SP291-201ENST00000517222 105 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC087369.1-201ENST00000520775 996 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC104576.1-201ENST00000524225 88 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC023442.1-201ENST00000531247 422 ntBASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.71□□□□□ -1.82
NDC1Q9BTX1 AC090132.2-201ENST00000615881 347 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms