Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU6-143P-201ENST00000516942 93 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 RNU6-1183P-201ENST00000517054 60 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 RNU6-64P-201ENST00000517119 105 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 SNORA31.23-201ENST00000517219 133 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC022662.1-201ENST00000580252 331 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC068790.3-201ENST00000602988 553 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK3BQ9BT76 AC002543.1-201ENST00000299783 1954 ntBASIC1.41□□□□□ -2.18
UPK3BQ9BT76 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 Y_RNA.465-201ENST00000384293 102 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 ERHP2-201ENST00000402323 299 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC019129.1-201ENST00000403786 261 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AL160275.3-201ENST00000423876 471 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AL451074.3-201ENST00000437709 472 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AL136380.1-201ENST00000447970 162 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AL021397.1-201ENST00000451806 248 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC068587.2-201ENST00000478386 781 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC106872.3-201ENST00000495104 446 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC116655.1-201ENST00000508324 901 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 MRPS17P9-201ENST00000511924 393 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 SNORA31.3-201ENST00000516029 96 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC091163.3-201ENST00000518269 1144 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 MIR4782-201ENST00000577987 79 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 MIR4287-201ENST00000579398 78 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 RNU6-88P-201ENST00000606801 100 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC034229.4-201ENST00000607861 441 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.4□□□□□ -2.19
UPK3BQ9BT76 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 AL136313.1-201ENST00000624804 202 ntBASIC1.4□□□□□ -2.19
UPK3BQ9BT76 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 RNU6-1159P-201ENST00000362933 107 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 RNU6-1284P-201ENST00000363701 100 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 Y_RNA.192-201ENST00000363977 102 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 RNU6-234P-201ENST00000365229 104 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 MIR676-201ENST00000390702 67 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AL023284.1-201ENST00000403956 276 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AL136310.1-201ENST00000404926 654 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 NDUFS5P1-201ENST00000405668 289 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 GSTA9P-201ENST00000406231 611 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 RPL7P34-201ENST00000433316 712 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AL353706.1-201ENST00000436728 494 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AP000949.1-201ENST00000438328 629 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 MTND4P25-201ENST00000441039 533 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AL161788.1-201ENST00000441805 169 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 BRK1P2-201ENST00000442875 223 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AL358794.1-201ENST00000445689 381 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 PMCHL2-203ENST00000457791 237 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AC018437.1-201ENST00000492214 406 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 RPL38P4-201ENST00000502376 214 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AC021146.8-201ENST00000507455 733 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 RNA5SP182-201ENST00000516064 82 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 EEF1A1P37-201ENST00000522748 715 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 LINC00933-203ENST00000559812 219 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 BNIP3P9-201ENST00000603714 553 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 MIR6715A-201ENST00000615929 79 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 DUXAP9-208ENST00000622815 614 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 AC092125.1-201ENST00000562568 1995 ntBASIC1.39□□□□□ -2.19
UPK3BQ9BT76 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK3BQ9BT76 TEX21P-201ENST00000447107 1476 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 SNORA67.3-201ENST00000384366 140 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 MIR561-201ENST00000385216 97 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC119751.3-201ENST00000399720 670 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK3BQ9BT76 MTATP6P20-201ENST00000414147 562 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 AL353621.1-201ENST00000418219 243 ntBASIC1.38□□□□□ -2.19
UPK3BQ9BT76 RPL31P63-201ENST00000422565 375 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms