Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 SNORA40C-201ENST00000391285 128 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AL117339.3-201ENST00000418733 162 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AC009237.8-201ENST00000445492 379 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AC073264.2-201ENST00000448886 166 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 PRELID3BP1-201ENST00000457142 540 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 SCARNA10-201ENST00000459255 330 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AC091178.1-203ENST00000584586 279 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AC008121.1-201ENST00000603244 268 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AC012603.1-201ENST00000606424 528 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 MIR7703-201ENST00000620784 77 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 MARK2P15-201ENST00000432204 2186 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 Z82210.1-201ENST00000440037 231 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AL139109.1-201ENST00000455491 297 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 RPL23AP65-201ENST00000475608 468 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 RPL23AP45-201ENST00000476406 468 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 RPL31P13-201ENST00000484151 370 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AK3P2-201ENST00000507976 429 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 RNU4-71P-201ENST00000516258 113 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-1073P-201ENST00000517182 106 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AC022868.1-201ENST00000517767 391 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 RAB9BP1-201ENST00000519581 626 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 IGLV3-26-201ENST00000520756 302 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AC118273.1-201ENST00000525324 3006 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AC006557.5-201ENST00000603126 811 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AC010201.1-201ENST00000605051 540 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 FTX_2.1-201ENST00000618816 94 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 AC027309.3-201ENST00000623419 351 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 U3.53-201ENST00000628922 216 ntBASIC4.59□□□□□ -1.67
TRIM56Q9BRZ2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM56Q9BRZ2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM56Q9BRZ2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM56Q9BRZ2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM56Q9BRZ2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM56Q9BRZ2 OR51H2P-202ENST00000641424 3046 ntBASIC4.59□□□□□ -1.68
TRIM56Q9BRZ2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.59□□□□□ -1.68
TRIM56Q9BRZ2 AC007785.2-201ENST00000598627 1916 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 SNORD81.1-201ENST00000363064 77 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.180-201ENST00000363867 113 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 RNU6-280P-201ENST00000364145 104 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.237-201ENST00000364439 102 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 RN7SKP227-201ENST00000364445 330 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 RNU1-63P-201ENST00000383902 164 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.439-201ENST00000384119 94 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.458-201ENST00000384240 102 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 MIR607-201ENST00000385241 96 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 RNU2-68P-201ENST00000410878 191 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC007919.1-201ENST00000429380 217 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC016831.4-201ENST00000438302 307 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC108022.1-201ENST00000493466 478 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC104164.2-201ENST00000496953 495 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 RNU6-612P-201ENST00000516909 102 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC025755.1-201ENST00000521306 278 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AP006289.1-201ENST00000538089 277 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC093023.1-201ENST00000547375 507 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AL442163.3-201ENST00000554110 156 ntBASIC4.58□□□□□ -1.68
TRIM56Q9BRZ2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms