Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 MIR9-1-201ENST00000385198 89 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 SNORA40C-201ENST00000391285 128 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AL360182.1-201ENST00000397433 468 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 RNA5SP21-201ENST00000410917 96 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AC236972.1-201ENST00000433225 199 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AL031667.1-201ENST00000440222 725 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AC009296.1-201ENST00000443146 155 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AC244505.5-201ENST00000443639 207 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AC079781.2-201ENST00000446424 169 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 DPPA3P1-201ENST00000448050 469 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 MTND1P27-201ENST00000451117 902 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 SNORD109B-201ENST00000458961 67 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 SNORD109A-201ENST00000459128 67 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 UBE2DNL-203ENST00000474922 222 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AC022447.1-201ENST00000515358 464 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.11□□□□□ -1.91
SDF4Q9BRK5 MIR4782-201ENST00000577987 79 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AC073544.2-201ENST00000601155 540 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 AL022154.1-201ENST00000604698 785 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 U6.99-201ENST00000637524 83 ntBASIC3.11□□□□□ -1.91
SDF4Q9BRK5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.11□□□□□ -1.91
SDF4Q9BRK5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AC062016.1-201ENST00000355719 319 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 Y_RNA.201-201ENST00000364052 96 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RNU1-112P-201ENST00000364401 164 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RNU6-395P-201ENST00000365662 106 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 Z98749.2-208ENST00000381646 500 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 MIR627-201ENST00000384979 97 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RNU6-1025P-201ENST00000410629 104 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 C1DP2-201ENST00000418167 426 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 PIGFP2-201ENST00000421400 651 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 NUP35P1-201ENST00000422734 947 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 MYL8P-204ENST00000431574 518 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RPS15AP7-201ENST00000439294 405 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 USP9YP29-201ENST00000445112 563 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 UBBP3-201ENST00000445497 241 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 ARL2BPP4-201ENST00000506854 471 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RNU5F-8P-201ENST00000515941 111 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RNU6-572P-201ENST00000516724 80 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RNU6-410P-201ENST00000517006 107 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AC040904.1-201ENST00000590850 223 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RPL12P50-201ENST00000603116 116 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 AL121992.2-201ENST00000606262 256 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 MIR6134-201ENST00000617606 109 ntBASIC3.1□□□□□ -1.91
SDF4Q9BRK5 RNU6-1097P-201ENST00000363586 107 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 RNU6-61P-201ENST00000365528 109 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 RNU6-108P-201ENST00000365558 107 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 SNORA26.7-201ENST00000391288 122 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SDF4Q9BRK5 RNU6-387P-201ENST00000411331 105 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 OR51A5P-201ENST00000415429 942 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.09□□□□□ -1.91
SDF4Q9BRK5 RPL31P35-201ENST00000431058 377 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 GPR143P-201ENST00000434155 205 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 MTATP6P16-201ENST00000434543 526 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.09□□□□□ -1.91
SDF4Q9BRK5 RPL31P3-201ENST00000458430 332 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.09□□□□□ -1.91
SDF4Q9BRK5 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.09□□□□□ -1.91
SDF4Q9BRK5 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 AC116562.3-201ENST00000506136 177 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.09□□□□□ -1.91
SDF4Q9BRK5 MTCO3P28-201ENST00000513351 515 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 SNORA31.19-201ENST00000517079 126 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 AC068587.5-201ENST00000528506 175 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.09□□□□□ -1.91
SDF4Q9BRK5 AL356057.1-201ENST00000533798 831 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.09□□□□□ -1.91
SDF4Q9BRK5 AC005261.5-201ENST00000596280 355 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 AC010620.1-201ENST00000601088 1102 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.09□□□□□ -1.91
SDF4Q9BRK5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.09□□□□□ -1.92
SDF4Q9BRK5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.09□□□□□ -1.92
SDF4Q9BRK5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.08□□□□□ -1.92
SDF4Q9BRK5 RNU6-859P-201ENST00000362728 107 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 RNU6-179P-201ENST00000363350 107 ntBASIC3.08□□□□□ -1.92
SDF4Q9BRK5 UBE2V1P2-201ENST00000397758 440 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms