Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC090888.2-201ENST00000559765 1144 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.25□□□□□ -2.05
NPAS2Q99743 MIR4307-201ENST00000582802 84 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 Z99289.3-201ENST00000605586 594 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC046143.2-201ENST00000609789 160 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AC087241.4-201ENST00000612441 480 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.25□□□□□ -2.05
NPAS2Q99743 AC024581.2-201ENST00000619986 252 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AL031667.3-201ENST00000620124 655 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 AP000770.2-201ENST00000623694 100 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.25□□□□□ -2.05
NPAS2Q99743 AC025048.6-202ENST00000627667 438 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 CU459211.1-201ENST00000635667 749 ntBASIC2.25□□□□□ -2.05
NPAS2Q99743 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.24□□□□□ -2.05
NPAS2Q99743 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.24□□□□□ -2.05
NPAS2Q99743 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NPAS2Q99743 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NPAS2Q99743 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
NPAS2Q99743 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NPAS2Q99743 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NPAS2Q99743 Y_RNA.302-201ENST00000364997 102 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
NPAS2Q99743 RNU6-701P-201ENST00000384059 107 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 RNU6-748P-201ENST00000384648 107 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 RNU2-62P-201ENST00000410868 191 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 ELOCP17-201ENST00000414751 326 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.24□□□□□ -2.05
NPAS2Q99743 RAC1P6-201ENST00000423911 575 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 RPS3AP44-201ENST00000425466 790 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.24□□□□□ -2.05
NPAS2Q99743 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.24□□□□□ -2.05
NPAS2Q99743 RNU6-953P-201ENST00000459154 107 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AC026436.1-201ENST00000510537 270 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 RNU6-143P-201ENST00000516942 93 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 RNU6-1183P-201ENST00000517054 60 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.24□□□□□ -2.05
NPAS2Q99743 AL158211.1-201ENST00000566763 763 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AC009127.3-201ENST00000570531 403 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 RPS15AP11-201ENST00000594193 385 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AP000811.1-201ENST00000603803 651 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.24□□□□□ -2.05
NPAS2Q99743 AC064859.1-201ENST00000624741 174 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 PISRT1-201ENST00000626175 531 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 AC092192.1-201ENST00000633154 1018 ntBASIC2.24□□□□□ -2.05
NPAS2Q99743 MTND4P35-201ENST00000604257 1375 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NPAS2Q99743 CDC27P3-201ENST00000635418 1910 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NPAS2Q99743 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NPAS2Q99743 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NPAS2Q99743 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.23□□□□□ -2.05
NPAS2Q99743 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS2Q99743 WARS2P1-201ENST00000429678 537 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS2Q99743 RPS15AP28-201ENST00000435088 386 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AL121890.1-201ENST00000435457 205 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 MTND5P2-201ENST00000442927 1142 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 IFNA11P-201ENST00000446352 526 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AL441985.1-201ENST00000457727 251 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AL139824.2-201ENST00000458731 1095 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.23□□□□□ -2.05
NPAS2Q99743 AC072039.1-201ENST00000477611 581 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.23□□□□□ -2.05
NPAS2Q99743 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.23□□□□□ -2.05
NPAS2Q99743 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 RNU6-1003P-201ENST00000517099 105 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS2Q99743 AC084851.1-201ENST00000529105 249 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS2Q99743 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS2Q99743 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS2Q99743 ISCA1P3-201ENST00000577104 373 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 MIR3146-201ENST00000580367 79 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 NRBF2P1-201ENST00000587407 859 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 BNIP3P9-201ENST00000603714 553 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AC107214.2-201ENST00000608204 634 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 uc_338.12-201ENST00000616344 181 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 MIR6134-201ENST00000617606 109 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AC131159.1-201ENST00000621854 213 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 FRG1KP-201ENST00000623592 341 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 AL359757.2-201ENST00000624309 274 ntBASIC2.23□□□□□ -2.05
NPAS2Q99743 TEX21P-201ENST00000447107 1476 ntBASIC2.22□□□□□ -2.05
NPAS2Q99743 Y_RNA.18-201ENST00000362461 102 ntBASIC2.22□□□□□ -2.05
NPAS2Q99743 Y_RNA.46-201ENST00000362695 102 ntBASIC2.22□□□□□ -2.05
NPAS2Q99743 RNA5SP125-201ENST00000364843 120 ntBASIC2.22□□□□□ -2.05
NPAS2Q99743 RNU4-53P-201ENST00000410828 140 ntBASIC2.22□□□□□ -2.05
NPAS2Q99743 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.22□□□□□ -2.05
NPAS2Q99743 AL592045.1-201ENST00000429867 352 ntBASIC2.22□□□□□ -2.05
NPAS2Q99743 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
NPAS2Q99743 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.22□□□□□ -2.05
NPAS2Q99743 Z98742.2-201ENST00000431564 187 ntBASIC2.22□□□□□ -2.05
NPAS2Q99743 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.22□□□□□ -2.05
NPAS2Q99743 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.22□□□□□ -2.05
NPAS2Q99743 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms