Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.16□□□□□ -2.22
IFT140Q96RY7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.16□□□□□ -2.22
IFT140Q96RY7 AC243960.4-201ENST00000600532 288 ntBASIC1.16□□□□□ -2.22
IFT140Q96RY7 AL109659.3-201ENST00000624985 950 ntBASIC1.16□□□□□ -2.22
IFT140Q96RY7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.16□□□□□ -2.22
IFT140Q96RY7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
IFT140Q96RY7 ZNF29P-201ENST00000225587 168 ntBASIC1.15□□□□□ -2.23
IFT140Q96RY7 MIR218-1-201ENST00000384999 110 ntBASIC1.15□□□□□ -2.23
IFT140Q96RY7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.15□□□□□ -2.23
IFT140Q96RY7 AC092628.1-201ENST00000436250 252 ntBASIC1.15□□□□□ -2.23
IFT140Q96RY7 AL592447.1-201ENST00000447592 540 ntBASIC1.15□□□□□ -2.23
IFT140Q96RY7 AC022447.1-201ENST00000515358 464 ntBASIC1.15□□□□□ -2.23
IFT140Q96RY7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.15□□□□□ -2.23
IFT140Q96RY7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.15□□□□□ -2.23
IFT140Q96RY7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.15□□□□□ -2.23
IFT140Q96RY7 MIR3921-201ENST00000577308 85 ntBASIC1.15□□□□□ -2.23
IFT140Q96RY7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.15□□□□□ -2.23
IFT140Q96RY7 AC004775.1-201ENST00000607389 753 ntBASIC1.15□□□□□ -2.23
IFT140Q96RY7 AL773524.1-201ENST00000614065 229 ntBASIC1.15□□□□□ -2.23
IFT140Q96RY7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
IFT140Q96RY7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
IFT140Q96RY7 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
IFT140Q96RY7 MIR325-201ENST00000385260 98 ntBASIC1.14□□□□□ -2.23
IFT140Q96RY7 HAR1A.1-201ENST00000459583 118 ntBASIC1.14□□□□□ -2.23
IFT140Q96RY7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.14□□□□□ -2.23
IFT140Q96RY7 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
IFT140Q96RY7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.14□□□□□ -2.23
IFT140Q96RY7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.14□□□□□ -2.23
IFT140Q96RY7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.14□□□□□ -2.23
IFT140Q96RY7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
IFT140Q96RY7 RNU6-444P-201ENST00000383988 108 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.13□□□□□ -2.23
IFT140Q96RY7 HMGB1P9-201ENST00000429856 646 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.13□□□□□ -2.23
IFT140Q96RY7 RAC1P7-201ENST00000445367 377 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 AC117454.1-201ENST00000491120 168 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.13□□□□□ -2.23
IFT140Q96RY7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
IFT140Q96RY7 MIR892C-201ENST00000516410 77 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 RNU6-1282P-201ENST00000516735 96 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.13□□□□□ -2.23
IFT140Q96RY7 EEF1B2P4-201ENST00000551398 348 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 AL133241.1-201ENST00000556832 487 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 7SK.7-201ENST00000603504 247 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 SUMO2P14-201ENST00000604488 293 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 AL021997.1-201ENST00000605757 193 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 AP002791.1-201ENST00000623291 381 ntBASIC1.13□□□□□ -2.23
IFT140Q96RY7 RNU6-673P-201ENST00000365084 104 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
IFT140Q96RY7 MIR1290-201ENST00000408735 78 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.12□□□□□ -2.23
IFT140Q96RY7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.12□□□□□ -2.23
IFT140Q96RY7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.12□□□□□ -2.23
IFT140Q96RY7 AL512844.2-201ENST00000433990 593 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 VPS26AP1-201ENST00000483197 979 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 AC139453.3-201ENST00000493276 369 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 RNU11-2P-201ENST00000516898 142 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.12□□□□□ -2.23
IFT140Q96RY7 AC090772.4-201ENST00000623599 362 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
IFT140Q96RY7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.12□□□□□ -2.23
IFT140Q96RY7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 RAB11AP1-201ENST00000442978 646 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.12□□□□□ -2.23
IFT140Q96RY7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.12□□□□□ -2.23
IFT140Q96RY7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.12□□□□□ -2.23
IFT140Q96RY7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
IFT140Q96RY7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
IFT140Q96RY7 SCARNA3-201ENST00000517097 143 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 MIR3126-201ENST00000577443 74 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 AC010738.1-201ENST00000604970 987 ntBASIC1.12□□□□□ -2.23
IFT140Q96RY7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.11□□□□□ -2.23
IFT140Q96RY7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.11□□□□□ -2.23
IFT140Q96RY7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.11□□□□□ -2.23
IFT140Q96RY7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.11□□□□□ -2.23
IFT140Q96RY7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
IFT140Q96RY7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
IFT140Q96RY7 HMGN2P15-201ENST00000585707 270 ntBASIC1.11□□□□□ -2.23
IFT140Q96RY7 AC068276.1-201ENST00000605793 379 ntBASIC1.11□□□□□ -2.23
IFT140Q96RY7 AL136313.1-201ENST00000624804 202 ntBASIC1.11□□□□□ -2.23
IFT140Q96RY7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.11□□□□□ -2.23
IFT140Q96RY7 OR4G3P-201ENST00000633500 913 ntBASIC1.11□□□□□ -2.23
IFT140Q96RY7 MIR6866-201ENST00000638146 69 ntBASIC1.11□□□□□ -2.23
IFT140Q96RY7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
IFT140Q96RY7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.1□□□□□ -2.23
IFT140Q96RY7 MIR421-201ENST00000365696 85 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 RNU6-1083P-201ENST00000384022 107 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
IFT140Q96RY7 AC023141.4-201ENST00000412031 328 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 EDDM3CP-201ENST00000415977 425 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 LINC01347-201ENST00000417964 355 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 AL158823.1-201ENST00000418441 478 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 AC024082.2-201ENST00000434771 238 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
IFT140Q96RY7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.1□□□□□ -2.23
IFT140Q96RY7 AC079448.1-201ENST00000449377 373 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 RPL23AP35-201ENST00000451906 501 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.1□□□□□ -2.23
IFT140Q96RY7 AC114786.4-201ENST00000508771 728 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 AC114797.1-201ENST00000514003 728 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms