Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX18Q96RF0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC008568.2-201ENST00000623862 2313 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNX18Q96RF0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNX18Q96RF0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 RNU6-50P-201ENST00000362356 103 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 RNU6-562P-201ENST00000362731 107 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 RNU6-805P-201ENST00000365643 106 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 RNU6-692P-201ENST00000384496 107 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 MIR578-201ENST00000384828 96 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 MIR670-201ENST00000390142 98 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 RNA5SP293-201ENST00000410527 113 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 RNU2-71P-201ENST00000411395 189 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AC063979.1-201ENST00000415539 377 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 Z85995.1-201ENST00000415547 335 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AL590383.1-201ENST00000428602 75 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 TBCAP1-201ENST00000436520 327 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AC010401.1-201ENST00000463867 348 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 TRBV12-2-201ENST00000489763 344 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AL160314.1-201ENST00000490836 438 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 SUMO2P6-201ENST00000505273 288 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 IMMP1LP2-201ENST00000552954 492 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 TRAV37-201ENST00000553906 342 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AL163153.1-201ENST00000554223 283 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 MIR3690-201ENST00000580266 75 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 MIR5692A1-201ENST00000580523 69 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNX18Q96RF0 AL161798.1-201ENST00000604630 131 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AC002044.1-201ENST00000606707 158 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 AC134503.1-201ENST00000633048 54 ntBASIC3.42□□□□□ -1.86
SNX18Q96RF0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNX18Q96RF0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.42□□□□□ -1.86
SNX18Q96RF0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNX18Q96RF0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 MTND4P27-201ENST00000450813 1354 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX18Q96RF0 SNORD42.2-201ENST00000365570 69 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX18Q96RF0 RNU6-474P-201ENST00000384243 107 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 RNU6-601P-201ENST00000384540 107 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 MIR548P-201ENST00000408336 84 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 RNA5SP129-201ENST00000410276 118 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 AL590632.1-201ENST00000424289 371 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 RPL23AP69-201ENST00000431134 458 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 AL360271.2-201ENST00000447710 161 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 AC096576.1-201ENST00000489014 359 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 RNU2-58P-201ENST00000516403 183 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 RN7SKP289-201ENST00000517244 295 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 TRMT10BP1-201ENST00000519377 943 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 CYCSP27-201ENST00000527643 293 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNX18Q96RF0 MIR5685-201ENST00000579080 79 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 MIR3158-1-201ENST00000583596 81 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 MIR3171-201ENST00000584270 74 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.41□□□□□ -1.86
SNX18Q96RF0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX18Q96RF0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNX18Q96RF0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX18Q96RF0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNX18Q96RF0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SNX18Q96RF0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SNX18Q96RF0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SNX18Q96RF0 MTCO1P12-201ENST00000414273 1543 ntBASIC3.4□□□□□ -1.86
SNX18Q96RF0 AC138393.1-203ENST00000327086 343 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNX18Q96RF0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 Y_RNA.216-201ENST00000364205 93 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 RNU6-266P-201ENST00000364225 107 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 RNU6-283P-201ENST00000364788 107 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 SNORA73.2-201ENST00000364946 201 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SNX18Q96RF0 MIR23A-201ENST00000385245 73 ntBASIC3.4□□□□□ -1.87
SNX18Q96RF0 MIR301A-201ENST00000385261 86 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms