Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AC004584.2-201ENST00000570407 410 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AL390123.1-201ENST00000603216 237 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AC099669.2-201ENST00000616549 437 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 MIR6852-201ENST00000621699 66 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AC130454.1-201ENST00000622948 401 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 FP236240.3-201ENST00000623061 327 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 MIR4275-201ENST00000636486 87 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AC093535.2-201ENST00000624769 2326 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 SNORD27-201ENST00000363981 72 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 Y_RNA.324-201ENST00000365165 102 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 Y_RNA.471-201ENST00000384312 102 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AL513475.1-201ENST00000406602 315 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AL360271.2-201ENST00000447710 161 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AC110792.1-201ENST00000491826 472 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 RNA5SP360-201ENST00000516555 118 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-143P-201ENST00000516942 93 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-897P-201ENST00000517135 105 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 RRN3P3-201ENST00000549207 578 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AC005951.2-201ENST00000576282 495 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AC022655.2-201ENST00000577280 318 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AC073410.2-201ENST00000603240 332 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AL121917.1-203ENST00000605534 577 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AL355810.1-201ENST00000614629 552 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AL391261.4-201ENST00000616012 481 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 AL159153.1-201ENST00000619688 317 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 SDR42E1P4-201ENST00000620894 481 ntBASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SYNGAP1Q96PV0 Y_RNA.276-201ENST00000364732 109 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 Y_RNA.533-201ENST00000384596 114 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 MIR521-1-201ENST00000384902 87 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-1093P-201ENST00000391194 107 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 MIR1179-201ENST00000408703 91 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 RPS20P1-201ENST00000434853 354 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 RANP8-201ENST00000444720 713 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 ABCF2P2-201ENST00000450549 296 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 TRBVB-201ENST00000477100 408 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 RPS29P2-201ENST00000479278 136 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 IGLV3-26-201ENST00000520756 302 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AP003733.2-201ENST00000529409 171 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AL606490.9-201ENST00000603331 271 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC137590.2-201ENST00000619709 240 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 Z99571.1-201ENST00000636677 394 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC090971.4-201ENST00000560291 1800 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 ASNSP1-201ENST00000518311 1939 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 RNU1-35P-201ENST00000362782 153 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-596P-201ENST00000365395 98 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 MTCO3P19-201ENST00000415864 321 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC007098.1-201ENST00000420122 367 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AL592045.1-201ENST00000429867 352 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC133134.1-201ENST00000466800 359 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 UBE2DNL-203ENST00000474922 222 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC025465.3-201ENST00000510570 311 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-138P-201ENST00000515952 107 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC087369.1-201ENST00000520775 996 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 TRAV32-201ENST00000553993 340 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 BDH2P1-201ENST00000602288 736 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC012603.1-201ENST00000606424 528 ntBASIC4.72□□□□□ -1.65
SYNGAP1Q96PV0 AC005183.1-201ENST00000603687 1979 ntBASIC4.71□□□□□ -1.65
SYNGAP1Q96PV0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.71□□□□□ -1.65
SYNGAP1Q96PV0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms