Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 MTND1P28-201ENST00000435623 950 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AL353706.1-201ENST00000436728 494 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 MTCO2P20-201ENST00000437339 673 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AC017099.1-201ENST00000448261 1028 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 ARPC3P5-201ENST00000448802 534 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AC079448.1-201ENST00000449377 373 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 RNU1-123P-201ENST00000458950 160 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.93□□□□□ -2.26
AP1S3Q96PC3 MTCYBP18-201ENST00000501056 747 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AC091860.1-201ENST00000505723 432 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.93□□□□□ -2.26
AP1S3Q96PC3 RNU1-92P-201ENST00000517017 135 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 RNU6-667P-201ENST00000517186 102 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.93□□□□□ -2.26
AP1S3Q96PC3 MIR4295-201ENST00000585286 85 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 BNIP3P27-201ENST00000599991 412 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 AL050343.2-201ENST00000607338 280 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 MIR8074-201ENST00000615081 81 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.93□□□□□ -2.26
AP1S3Q96PC3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
AP1S3Q96PC3 CBX3P1-201ENST00000325243 554 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 RNU6-492P-201ENST00000363035 104 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AL139421.1-201ENST00000423010 169 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 USP9YP35-201ENST00000435696 412 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC002542.1-201ENST00000440683 193 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC007000.2-201ENST00000442564 487 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 GTF2IP12-201ENST00000456547 356 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 SNORD97-201ENST00000459187 142 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 SNORD13-201ENST00000459299 104 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 TMEM251P1-201ENST00000503717 318 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC010460.2-201ENST00000509054 677 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC119751.5-201ENST00000514077 770 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 RNU6-581P-201ENST00000516214 105 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 SNORA48.9-201ENST00000516419 162 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AP005660.1-201ENST00000522972 293 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC019288.1-201ENST00000557918 224 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC067805.1-201ENST00000559344 470 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AL450270.1-201ENST00000606160 391 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 RMST_6.1-201ENST00000611980 203 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 AC090517.3-201ENST00000625170 141 ntBASIC0.92□□□□□ -2.26
AP1S3Q96PC3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.92□□□□□ -2.26
AP1S3Q96PC3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AL138713.1-201ENST00000624026 2130 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 ZNF209P-201ENST00000593450 2304 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 TMSB4XP8-201ENST00000402089 135 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 PIGPP2-201ENST00000411569 458 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 TMSB4XP6-201ENST00000415187 135 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 MTATP6P27-201ENST00000416987 621 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 TMSB4XP1-201ENST00000424567 135 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 RPS29P28-201ENST00000446439 141 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 MTND5P8-201ENST00000449817 1083 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC026410.2-201ENST00000460281 156 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC112771.1-201ENST00000463581 102 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 RNU6-678P-201ENST00000516832 109 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC090821.2-201ENST00000523552 176 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AL161670.1-201ENST00000554348 137 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC073544.2-201ENST00000601155 540 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC011451.2-201ENST00000604303 598 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AL645939.4-201ENST00000604495 135 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AL390208.1-201ENST00000605885 644 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC008121.3-201ENST00000618726 433 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
AP1S3Q96PC3 AP000560.1-201ENST00000624150 1937 ntBASIC0.91□□□□□ -2.26
AP1S3Q96PC3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
AP1S3Q96PC3 RNU6-271P-201ENST00000363858 105 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 RNU6-1164P-201ENST00000364428 107 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 RPL22P22-201ENST00000395439 379 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 AL133475.1-201ENST00000404414 305 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 MRPL35P3-201ENST00000421557 364 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 BX119904.4-201ENST00000424402 301 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 MTND4LP14-201ENST00000429447 288 ntBASIC0.9□□□□□ -2.27
AP1S3Q96PC3 MTND4LP7-201ENST00000431728 294 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms