Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AL358934.1-201ENST00000432346 324 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 RPL35AP22-201ENST00000436855 335 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 RPS3AP12-201ENST00000443616 753 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC244505.5-201ENST00000443639 207 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 AL513328.1-201ENST00000446460 224 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 Z83846.1-201ENST00000446798 265 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 DPPA3P1-201ENST00000448050 469 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 EEF1B2P7-201ENST00000451177 676 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 SNORD42A-201ENST00000459584 64 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 RN7SKP132-201ENST00000516001 208 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 Y_RNA.672-201ENST00000516289 104 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 SNORA18.6-201ENST00000516792 115 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 RN7SKP258-201ENST00000517151 304 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC024619.4-201ENST00000580924 316 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC040904.1-201ENST00000590850 223 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 BNIP3P33-201ENST00000598912 569 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC098826.3-201ENST00000603823 466 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AL645944.1-201ENST00000603857 493 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC090578.1-201ENST00000604955 591 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 RN7SKP299-201ENST00000606679 301 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 RNU6-87P-201ENST00000607561 108 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC090970.3-201ENST00000612566 866 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC005332.10-201ENST00000612725 619 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC130324.3-201ENST00000614165 542 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC013476.2-201ENST00000614456 459 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AL589994.2-201ENST00000621124 579 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 MIR7515-201ENST00000637837 67 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LINC00477Q96M19 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
LINC00477Q96M19 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
LINC00477Q96M19 UBE2L2-201ENST00000254302 429 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 RNU6-217P-201ENST00000384164 104 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 RNU5A-2P-201ENST00000384337 116 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AL355497.1-201ENST00000406262 551 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 BTF3L4P1-201ENST00000413813 468 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 HMGB3P12-201ENST00000438745 556 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 CYCSP32-201ENST00000440548 321 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 MTND1P29-201ENST00000448112 647 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 MTND1P12-201ENST00000455231 147 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 RNA5SP269-201ENST00000459032 137 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 RPL23AP45-201ENST00000476406 468 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC023141.11-201ENST00000508864 202 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC090572.1-201ENST00000519251 160 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC022634.1-201ENST00000520765 532 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 PRELID2P1-201ENST00000552837 301 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 RPL23AP84-201ENST00000571193 464 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 MIR3200-201ENST00000580767 85 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 HMGN2P15-201ENST00000585707 270 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC002545.1-201ENST00000592511 181 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AC121334.2-201ENST00000605387 271 ntBASIC1.85□□□□□ -2.11
LINC00477Q96M19 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
LINC00477Q96M19 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LINC00477Q96M19 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LINC00477Q96M19 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
LINC00477Q96M19 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LINC00477Q96M19 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LINC00477Q96M19 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LINC00477Q96M19 RNY4P24-201ENST00000362735 96 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 Y_RNA.77-201ENST00000362962 107 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 SNORD56.2-201ENST00000363242 71 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 Y_RNA.201-201ENST00000364052 96 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 Y_RNA.318-201ENST00000365131 97 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 SNORA80E-201ENST00000384744 137 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC068050.1-201ENST00000394891 380 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 RPL23AP32-201ENST00000395315 459 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 AC023141.4-201ENST00000412031 328 ntBASIC1.84□□□□□ -2.11
LINC00477Q96M19 MTND3P17-201ENST00000416968 344 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms