Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AL133384.1-201ENST00000412744 351 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 MTCO3P19-201ENST00000415864 321 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 AC243428.1-201ENST00000421099 264 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AL590135.1-201ENST00000422215 156 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 PIGPP3-201ENST00000425307 415 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AL159987.2-201ENST00000432754 307 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 RPL23AP74-201ENST00000437246 471 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 FTH1P1-201ENST00000437933 532 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 HMGB1P37-201ENST00000439613 609 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AC112492.4-201ENST00000456549 352 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 RNU7-170P-201ENST00000459303 61 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AP000893.1-201ENST00000474462 794 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 FO393415.2-201ENST00000480085 343 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 RNU6-475P-201ENST00000516073 104 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 Y_RNA.708-201ENST00000516950 96 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 IGKV2-38-201ENST00000517443 247 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AP004371.1-201ENST00000525240 214 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 AC060771.1-201ENST00000582031 164 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 HSPE1P14-201ENST00000605812 302 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AC245517.5-201ENST00000611529 162 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 PISRT1.1-201ENST00000616930 107 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AL773545.4-201ENST00000637262 310 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 AL513478.4-201ENST00000641636 310 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHFRQ96EP1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHFRQ96EP1 MFSD8-236ENST00000641509 4050 ntBASIC3.9□□□□□ -1.78
CHFRQ96EP1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHFRQ96EP1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHFRQ96EP1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CHFRQ96EP1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 RNU6-28P-201ENST00000362378 107 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 U3.11-201ENST00000364476 212 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 SNORA20.1-201ENST00000364790 130 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 RNU6-641P-201ENST00000384006 107 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 AL138878.1-201ENST00000405131 347 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 AP000567.1-201ENST00000406413 156 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 RNU2-23P-201ENST00000410545 195 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 RNA5SP306-201ENST00000411087 107 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC236972.1-201ENST00000433225 199 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 RPS17P13-201ENST00000448974 407 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 AL353752.1-201ENST00000454946 260 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC025554.1-201ENST00000505641 188 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC022493.2-201ENST00000506122 481 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC107016.1-201ENST00000550463 337 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 U3.45-201ENST00000607547 219 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 AC103705.1-201ENST00000619013 241 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.9□□□□□ -1.79
CHFRQ96EP1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CHFRQ96EP1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.9□□□□□ -1.79
CHFRQ96EP1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHFRQ96EP1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 Y_RNA.26-201ENST00000362539 101 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 RNU6-511P-201ENST00000363496 107 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 RNU6-187P-201ENST00000384139 106 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 MIR450B-201ENST00000401182 78 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 SNAP23P1-201ENST00000433229 246 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 MTND4LP30-201ENST00000454092 297 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 AC007967.1-201ENST00000455422 1159 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 AC005726.1-201ENST00000494679 427 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 RAC1P2-201ENST00000511164 579 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 Y_RNA.673-201ENST00000516306 88 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 RNA5SP384-201ENST00000516615 116 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 AC022616.4-201ENST00000522985 181 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 MIR3690-201ENST00000580266 75 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 AC024619.4-201ENST00000580924 316 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 HMGB1P50-201ENST00000605814 607 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 AL591424.2-201ENST00000617023 128 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 FTX_2.1-201ENST00000618816 94 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms