Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RPS24P13-201ENST00000442520 397 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AL590639.1-201ENST00000456484 337 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 PMCHL2-203ENST00000457791 237 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 RN7SL330P-201ENST00000469709 307 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC084357.1-201ENST00000473404 255 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC012181.1-201ENST00000479895 423 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC008628.2-201ENST00000502605 298 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 CCDC34P1-201ENST00000507441 517 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC104136.1-201ENST00000512969 394 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC023050.3-201ENST00000541142 333 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC005476.1-201ENST00000554427 397 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AL360157.1-201ENST00000565962 87 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 MIR548AC-201ENST00000585049 88 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 RNVU1-4-201ENST00000612985 164 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AC090617.10-201ENST00000624308 134 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 AL049641.1-201ENST00000441055 1948 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 MAPK10-253ENST00000641010 4072 ntBASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
TRIM43Q96BQ3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AC010733.2-201ENST00000589496 5702 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 MTND4P12-201ENST00000498999 1377 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AC002546.1-201ENST00000588041 2504 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RNU1-18P-201ENST00000363062 164 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RNU6-82P-201ENST00000363970 107 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RNA5SP42-201ENST00000364278 115 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 SNORA4.3-201ENST00000365564 137 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RNU6-767P-201ENST00000384132 107 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RNA5SP306-201ENST00000411087 107 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 ARF4P2-201ENST00000430209 526 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 FABP5P15-201ENST00000453566 214 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 RPL21P41-201ENST00000459863 264 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 SUMO2P6-201ENST00000505273 288 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 UBE2V2P2-201ENST00000587677 504 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AC073657.2-201ENST00000605661 303 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AC092807.2-201ENST00000609367 243 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AC013412.1-201ENST00000610687 192 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AP003400.5-201ENST00000624827 617 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 AL136164.4-201ENST00000625013 2135 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 CUL1P1-201ENST00000509510 2425 ntBASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TRIM43Q96BQ3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM43Q96BQ3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM43Q96BQ3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
TRIM43Q96BQ3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM43Q96BQ3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.65□□□□□ -1.82
TRIM43Q96BQ3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM43Q96BQ3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 CBX3P1-201ENST00000325243 554 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 SNORA32.2-201ENST00000384049 122 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 HMGB3P11-201ENST00000440127 604 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 RPL7P12-201ENST00000446719 750 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 CECR9-201ENST00000453421 199 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 RNA5SP310-201ENST00000459084 116 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 RN7SL863P-201ENST00000462370 296 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AP000852.1-201ENST00000472460 573 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC046134.1-201ENST00000514454 666 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 BTF3P12-201ENST00000519620 469 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 RPL7P20-201ENST00000520308 745 ntBASIC3.65□□□□□ -1.83
TRIM43Q96BQ3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms