Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SNORA70.4-201ENST00000365509 134 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 SNORD42.2-201ENST00000365570 69 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 Y_RNA.414-201ENST00000384011 101 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 MIR181B1-201ENST00000385240 110 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 OR6C66P-201ENST00000414917 930 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 BEND7P1-201ENST00000422058 457 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 ARF4P2-201ENST00000430209 526 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 RPL23AP83-201ENST00000434984 473 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 RPS3AP52-201ENST00000435639 297 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC009969.1-201ENST00000438726 172 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 PRPS1P1-201ENST00000445305 876 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC020550.1-201ENST00000447385 163 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 SNRPFP3-201ENST00000457792 225 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 RNU6-1208P-201ENST00000459588 107 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 RPS27AP1-201ENST00000475545 471 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AP000926.1-201ENST00000479573 241 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 MTCO1P29-201ENST00000496868 288 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC098591.2-201ENST00000510152 315 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC103783.1-201ENST00000520506 373 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 HMGN1P28-201ENST00000521340 364 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AP001804.3-201ENST00000525146 880 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 PTP4A1P6-201ENST00000531034 478 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AL137161.1-201ENST00000532231 390 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AL161713.1-201ENST00000555538 145 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AL031176.1-201ENST00000604554 466 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC092807.2-201ENST00000609367 243 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AL390240.1-201ENST00000612950 384 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 TUG1_2.1-201ENST00000614234 87 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 AC004696.1-201ENST00000614345 607 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 uc_338.15-201ENST00000615470 191 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 uc_338.34-201ENST00000617467 174 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 U6.114-201ENST00000636407 96 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.14□□□□□ -1.91
LMO3Q8TAP4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMO3Q8TAP4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 MTCO1P24-201ENST00000515438 1558 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 MIR422A-201ENST00000362286 90 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 RNA5SP387-201ENST00000364226 106 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 Y_RNA.493-201ENST00000384422 102 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 RN7SKP58-201ENST00000411010 305 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AL451074.5-201ENST00000415894 435 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 RPL7P46-201ENST00000425129 740 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 PSMA2P3-201ENST00000429685 675 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 GTF2IP13-201ENST00000438487 386 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 snoU13.3-201ENST00000459441 104 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 RPL27AP5-201ENST00000469428 449 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC083904.1-201ENST00000487828 231 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 RN7SL283P-201ENST00000489055 303 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 MTND5P5-201ENST00000503764 376 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 SNORA25.17-201ENST00000517184 124 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AP005639.2-201ENST00000527592 928 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AP003385.6-201ENST00000531603 374 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC093249.1-201ENST00000567049 203 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 MIR5195-201ENST00000583555 115 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 BNIP3P25-201ENST00000596023 559 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC006254.3-201ENST00000603353 884 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AP001836.1-201ENST00000604675 523 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC090115.4-201ENST00000609970 188 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AL713922.2-201ENST00000619384 716 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC091953.5-201ENST00000622919 233 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 AC134503.1-201ENST00000633048 54 ntBASIC3.13□□□□□ -1.91
LMO3Q8TAP4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO3Q8TAP4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms