Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 TRBVA-201ENST00000498804 316 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 SNORA19.2-201ENST00000516013 114 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 SNORA70.16-201ENST00000516390 95 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 RNA5SP291-201ENST00000517222 105 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 IGKV2-26-201ENST00000518305 343 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 GLYCAM1-201ENST00000546596 285 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 SCOCP1-201ENST00000554676 349 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 MIR5692A1-201ENST00000580523 69 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 AC104237.2-201ENST00000612456 443 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.21□□□□□ -1.73
SMC1BQ8NDV3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SMC1BQ8NDV3 HSPA8P4-201ENST00000511877 1920 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 SNORA16.2-201ENST00000390991 127 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 HMGB1P18-201ENST00000438801 619 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 RNU7-167P-201ENST00000459160 62 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 RPL21P104-201ENST00000464143 478 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 RNA5SP208-201ENST00000516156 78 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 OR5D17P-201ENST00000531492 978 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 MIR4795-201ENST00000584182 89 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 CTHRC1P1-201ENST00000605383 469 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 AC073657.2-201ENST00000605661 303 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 AL512643.1-201ENST00000635735 524 ntBASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SMC1BQ8NDV3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.167-201ENST00000363735 109 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 RNU6-512P-201ENST00000364438 103 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.509-201ENST00000384506 99 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.535-201ENST00000384612 99 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 MIR301A-201ENST00000385261 86 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AL592045.1-201ENST00000429867 352 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 DYNLL1P5-201ENST00000467158 270 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 RPL31P60-201ENST00000478450 367 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 RPL21P93-201ENST00000480465 489 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC069499.1-201ENST00000489433 509 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AL160314.1-201ENST00000490836 438 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 YWHAEP4-201ENST00000505390 198 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC079140.5-201ENST00000507882 310 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 RNU2-69P-201ENST00000516061 100 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 RNU6-864P-201ENST00000516256 108 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 RNU2-58P-201ENST00000516403 183 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 RNA5SP468-201ENST00000516782 93 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC008011.1-201ENST00000545989 227 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC098826.3-201ENST00000603823 466 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 AC106900.2-201ENST00000604994 317 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 U4.6-201ENST00000621618 127 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 MIR1302-1-201ENST00000637932 143 ntBASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SMC1BQ8NDV3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 RNU6-741P-201ENST00000383889 107 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.534-201ENST00000384599 112 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AL357075.1-201ENST00000404107 726 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 RNA5SP129-201ENST00000410276 118 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 RNA5SP293-201ENST00000410527 113 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 HMGB3P11-201ENST00000440127 604 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 RNU7-66P-201ENST00000459469 62 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 RPL21P41-201ENST00000459863 264 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AC084198.1-201ENST00000477747 402 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AC012181.1-201ENST00000479895 423 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 SNORA70.14-201ENST00000516205 110 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 Y_RNA.691-201ENST00000516611 103 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 RNA5SP471-201ENST00000516971 106 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AP001804.3-201ENST00000525146 880 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AL161798.1-201ENST00000604630 131 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AL121757.2-201ENST00000611223 313 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AP003355.3-201ENST00000623465 114 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 AC022418.1-201ENST00000624118 445 ntBASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMC1BQ8NDV3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms