Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RPL36AP53-201ENST00000432891 316 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 RNU7-180P-201ENST00000459240 63 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AC006445.1-201ENST00000491925 405 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 SUMO2P6-201ENST00000505273 288 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 RNU4-29P-201ENST00000515943 174 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 RNA5SP165-201ENST00000517142 115 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 PSMA2P1-201ENST00000526365 646 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 TRAV37-201ENST00000553906 342 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 MIR1273C-201ENST00000578669 77 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 MIR4325-201ENST00000583049 90 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AC011471.1-201ENST00000585766 187 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 HSPE1P7-201ENST00000604681 321 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 FTX_3.1-201ENST00000610451 147 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AL162274.2-201ENST00000614406 332 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AC099506.2-201ENST00000623074 221 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 AC005183.1-201ENST00000603687 1979 ntBASIC2.99□□□□□ -1.93
BEST3Q8N1M1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.99□□□□□ -1.93
BEST3Q8N1M1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 ASNSP3-201ENST00000451989 1306 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 RNU6-451P-201ENST00000362921 107 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 SNORD56.3-201ENST00000363507 71 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC012181.1-201ENST00000479895 423 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 RPL38P4-201ENST00000502376 214 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC091885.1-201ENST00000506658 268 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 LRRC34P2-201ENST00000514850 553 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 MIR2276-201ENST00000516886 89 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC104027.1-201ENST00000521887 300 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 SUB1P1-201ENST00000524415 382 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AP003122.3-201ENST00000526316 255 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC084851.1-201ENST00000529105 249 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AL138976.2-201ENST00000563989 694 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC006111.3-201ENST00000622137 383 ntBASIC2.98□□□□□ -1.93
BEST3Q8N1M1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
BEST3Q8N1M1 AC007256.1-201ENST00000392253 2765 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 MIR148B-201ENST00000362252 99 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 RNU6-395P-201ENST00000365662 106 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 AL139039.1-201ENST00000401900 692 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 OR9R1P-201ENST00000412200 877 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 NEK4P1-201ENST00000433383 879 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 RBMX2P4-201ENST00000441256 376 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 NFU1P2-201ENST00000448700 469 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 RPL21P41-201ENST00000459863 264 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 RPL31P58-201ENST00000469001 379 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 RPS29P25-201ENST00000481709 171 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 AC104136.1-201ENST00000512969 394 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 RNA5SP341-201ENST00000516261 117 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 MTND4P7-201ENST00000523876 130 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 AL133241.1-201ENST00000556832 487 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 AL157871.3-201ENST00000557231 293 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 MIR4474-201ENST00000579189 78 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 MIR5692A1-201ENST00000580523 69 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 MIR4424-201ENST00000585257 86 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 DUSP12P1-201ENST00000612874 516 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 uc_338.34-201ENST00000617467 174 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.97□□□□□ -1.93
BEST3Q8N1M1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
BEST3Q8N1M1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 RNU6-371P-201ENST00000364283 108 ntBASIC2.96□□□□□ -1.94
BEST3Q8N1M1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
BEST3Q8N1M1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms