Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SIX5Q8N196 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX5Q8N196 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX5Q8N196 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX5Q8N196 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX5Q8N196 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX5Q8N196 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX5Q8N196 Y_RNA.180-201ENST00000363867 113 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 SNORD58.1-201ENST00000391313 66 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 UBA52P6-201ENST00000399822 382 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 AL357515.1-201ENST00000402967 542 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 RNA5SP44-201ENST00000410446 133 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 RNA5SP31-201ENST00000411144 127 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 RAB9AP3-201ENST00000412737 573 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX5Q8N196 COX6CP13-201ENST00000428703 226 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX5Q8N196 HMGN2P21-201ENST00000447764 270 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 RAB9AP1-201ENST00000449393 573 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 RNU6-1183P-201ENST00000517054 60 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 AC090281.1-201ENST00000523019 276 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 LINC00933-203ENST00000559812 219 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 MIR7853-201ENST00000584820 132 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX5Q8N196 ARF4P1-201ENST00000605447 541 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX5Q8N196 ZYXP1-201ENST00000617638 118 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 MIR6839-201ENST00000620425 113 ntBASIC4.93□□□□□ -1.62
SIX5Q8N196 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SIX5Q8N196 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX5Q8N196 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX5Q8N196 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
SIX5Q8N196 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX5Q8N196 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
SIX5Q8N196 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SIX5Q8N196 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX5Q8N196 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX5Q8N196 AP001273.1-201ENST00000624493 3152 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX5Q8N196 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX5Q8N196 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX5Q8N196 RNU6-879P-201ENST00000364328 108 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 MIR1298-201ENST00000408783 112 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 Y_RNA.793-201ENST00000411222 111 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX5Q8N196 AP000907.1-201ENST00000428428 510 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 AL512844.2-201ENST00000433990 593 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 AC007389.2-201ENST00000434630 306 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SIX5Q8N196 RPL23AP75-201ENST00000491601 451 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 SERF1AP1-201ENST00000514575 187 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 AP001781.1-201ENST00000530977 207 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX5Q8N196 AC010928.2-201ENST00000588017 287 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 AC024153.1-201ENST00000603103 365 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 RMST_6.1-201ENST00000611980 203 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 U2.14-201ENST00000615943 113 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX5Q8N196 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX5Q8N196 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SIX5Q8N196 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.92□□□□□ -1.62
SIX5Q8N196 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SIX5Q8N196 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX5Q8N196 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX5Q8N196 RNU6-926P-201ENST00000384075 107 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 RNU6-17P-201ENST00000384245 107 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 RNU6-18P-201ENST00000384527 107 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 SNORA70C-201ENST00000384538 135 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 MIR32-201ENST00000384965 70 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 AL035079.1-201ENST00000405210 287 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 PPIAP31-201ENST00000405422 495 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.91□□□□□ -1.62
SIX5Q8N196 RPL37P4-201ENST00000448908 268 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 SNORA84-201ENST00000459229 133 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 RN7SL441P-201ENST00000492388 296 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX5Q8N196 CYCSP39-201ENST00000565821 309 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 ZNF192P1-203ENST00000565888 810 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 AC012603.1-201ENST00000606424 528 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.91□□□□□ -1.62
SIX5Q8N196 U2.22-201ENST00000636441 106 ntBASIC4.91□□□□□ -1.62
SIX5Q8N196 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX5Q8N196 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX5Q8N196 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX5Q8N196 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX5Q8N196 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SIX5Q8N196 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SIX5Q8N196 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.9□□□□□ -1.62
SIX5Q8N196 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SIX5Q8N196 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SIX5Q8N196 RNU1-108P-201ENST00000362556 161 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 RNU4-90P-201ENST00000362773 141 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 Y_RNA.83-201ENST00000363005 113 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 RNU6-290P-201ENST00000365212 101 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIX5Q8N196 RNU6-1286P-201ENST00000383871 107 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 MIR153-2-201ENST00000385225 87 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 MIR493-201ENST00000385254 89 ntBASIC4.9□□□□□ -1.63
SIX5Q8N196 SNORA53-201ENST00000391141 249 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms