Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC010620.2-201ENST00000600135 313 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC073648.5-201ENST00000603502 305 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC104763.2-201ENST00000604179 382 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AL161729.4-201ENST00000604650 476 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC072046.2-201ENST00000618366 268 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC068880.5-201ENST00000624331 290 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 CTSLP2-204ENST00000629029 392 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC073343.1-201ENST00000328239 651 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RNU6-960P-201ENST00000364056 120 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 Y_RNA.436-201ENST00000384097 102 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RNU6-217P-201ENST00000384164 104 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RNU6-1119P-201ENST00000384349 108 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 MIR558-201ENST00000384920 94 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 MTND3P17-201ENST00000416968 344 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 GPM6BP2-201ENST00000432046 144 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RPL23AP30-201ENST00000432419 501 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 GPM6BP1-201ENST00000446387 144 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC079448.1-201ENST00000449377 373 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC093899.1-201ENST00000457984 376 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RNU6-953P-201ENST00000459154 107 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RN7SL429P-201ENST00000479090 223 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC233702.1-201ENST00000482905 502 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RN7SL489P-201ENST00000486185 223 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RN7SL327P-201ENST00000488659 223 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC138853.1-201ENST00000503549 823 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AP003122.3-201ENST00000526316 255 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AP002963.1-201ENST00000530590 184 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC024909.2-201ENST00000553035 286 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AL139286.2-201ENST00000606838 396 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC103591.3-201ENST00000608684 209 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC107294.1-201ENST00000609524 467 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AL589743.7-201ENST00000612637 233 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC130324.3-201ENST00000614165 542 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 AC091834.1-201ENST00000614543 472 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 RN7SL853P-201ENST00000617250 223 ntBASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC60Q8IWA6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
CCDC60Q8IWA6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 SNORD56.5-201ENST00000364281 72 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RNU6-190P-201ENST00000384154 102 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 Y_RNA.559-201ENST00000384686 107 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RNU6-817P-201ENST00000391083 104 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RPL21P75-201ENST00000396599 483 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RPL21P28-201ENST00000401418 483 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AL592114.1-201ENST00000403842 483 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RNU2-39P-201ENST00000410604 198 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC092809.3-201ENST00000415453 231 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 MED13P1-201ENST00000428342 171 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AL592045.1-201ENST00000429867 352 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AL591212.2-201ENST00000433923 257 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RPL36AP6-201ENST00000435770 321 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 MTCYBP1-201ENST00000454315 1119 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 MTCO2P18-201ENST00000457151 658 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RPL21P39-201ENST00000463605 483 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RPL21P93-201ENST00000480465 489 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC087190.1-201ENST00000484462 480 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC093591.1-201ENST00000491435 481 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RPL21P16-201ENST00000495531 483 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RNU6-826P-201ENST00000516827 104 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RNU6-677P-201ENST00000516914 101 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 MIR4435-1-201ENST00000582552 80 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC004805.2-201ENST00000605382 482 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AL121992.2-201ENST00000606262 256 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AL365204.3-201ENST00000612448 685 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 AC022336.2-201ENST00000568966 2538 ntBASIC2.77□□□□□ -1.97
CCDC60Q8IWA6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 Y_RNA.22-201ENST00000362492 102 ntBASIC2.76□□□□□ -1.97
CCDC60Q8IWA6 RNA5SP456-201ENST00000364002 114 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms