Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC103710.2-201ENST00000609912 942 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC006338.1-201ENST00000618453 749 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL391262.2-201ENST00000622466 494 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 MIR203B-201ENST00000636080 86 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 U6.99-201ENST00000637524 83 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL136360.1-201ENST00000503377 1900 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 MTND4P1-201ENST00000457501 1466 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL359851.1-201ENST00000569460 4997 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 SNORA72.3-201ENST00000365074 132 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 RNA5SP138-201ENST00000365098 114 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 OR51A5P-201ENST00000415429 942 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 MTND1P23-201ENST00000416931 372 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 SRIP2-201ENST00000428470 166 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 RPL22P17-201ENST00000438729 315 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC118469.1-201ENST00000442943 488 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 SNORD97-201ENST00000459187 142 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC126389.1-201ENST00000477436 290 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC026801.1-201ENST00000497178 464 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-581P-201ENST00000516214 105 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 RNU7-193P-201ENST00000516723 65 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 MTND4LP18-201ENST00000526864 291 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 ZNF519P3-201ENST00000557158 1032 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC234778.2-201ENST00000566241 354 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 BNIP3P9-201ENST00000603714 553 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC104763.2-201ENST00000604179 382 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC026790.2-201ENST00000606282 430 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AL356266.1-201ENST00000623311 483 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 PISRT1-201ENST00000626175 531 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 Z99571.1-201ENST00000636677 394 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC010149.2-201ENST00000637608 315 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 AC092104.1-201ENST00000497346 1441 ntBASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.13□□□□□ -2.07
NUDCD3Q8IVD9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 Z98749.2-208ENST00000381646 500 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 CYCSP48-201ENST00000417124 323 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 RPL30P4-201ENST00000429309 333 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 Z98742.2-201ENST00000431564 187 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 MICF-203ENST00000432679 129 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AL118520.1-201ENST00000450770 291 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC092001.1-201ENST00000453012 261 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-953P-201ENST00000459154 107 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-143P-201ENST00000516942 93 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 SCARNA3-201ENST00000517097 143 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC009902.1-201ENST00000519351 183 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AP003122.3-201ENST00000526316 255 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC084851.1-201ENST00000529105 249 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC010186.2-204ENST00000537668 439 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 MIR3118-1-201ENST00000581787 76 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC008751.2-201ENST00000597885 980 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC007938.3-201ENST00000604965 623 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC121334.2-201ENST00000605387 271 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 AC091953.2-201ENST00000623979 160 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 MIR7157-201ENST00000635801 60 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 MTND5P42-201ENST00000637720 498 ntBASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
NUDCD3Q8IVD9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 RNU5E-6P-201ENST00000365574 115 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-19P-201ENST00000384718 107 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 PTGES3P4-201ENST00000426243 356 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 FABP5P14-201ENST00000437273 393 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC004383.1-201ENST00000438135 289 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms