Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNU6-968P-201ENST00000384076 107 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 RNU6-959P-201ENST00000384671 107 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 SNORA77-201ENST00000408716 125 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 RPEP3-201ENST00000425462 676 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 AC009238.2-201ENST00000431026 355 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 AC009296.1-201ENST00000443146 155 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 HSPE1P25-201ENST00000455484 251 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 RPL23AP56-201ENST00000460778 453 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 AC011276.1-201ENST00000469688 323 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 MIR4472-2-201ENST00000582069 67 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 AC034229.5-201ENST00000624258 185 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 U6.99-201ENST00000637524 83 ntBASIC5.12□□□□□ -1.59
RNF135Q8IUD6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 RNA5SP28-201ENST00000363841 119 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 Y_RNA.240-201ENST00000364469 95 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 RNU6-17P-201ENST00000384245 107 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 SNORD63-201ENST00000384262 68 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 RNU6-18P-201ENST00000384527 107 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 SNORA22C-201ENST00000384614 134 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 RNU6-417P-201ENST00000384712 107 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 AL033519.2-201ENST00000403958 392 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 RN7SKP16-201ENST00000410180 299 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 SNRPEP9-201ENST00000436794 238 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 AC016831.4-201ENST00000438302 307 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 snoU13.22-201ENST00000459428 104 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 AC091167.1-201ENST00000492017 396 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 ENPP7P11-201ENST00000505915 627 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 AC020593.1-201ENST00000507399 299 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 SNORA31.8-201ENST00000516327 108 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 AC136601.2-201ENST00000604356 474 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 BX322639.1-202ENST00000423987 2213 ntBASIC5.11□□□□□ -1.59
RNF135Q8IUD6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RNF135Q8IUD6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 AC007390.2-201ENST00000606229 3803 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 Y_RNA.44-201ENST00000362676 108 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 U3.39-201ENST00000408569 239 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 BMS1P22-201ENST00000414726 313 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 CYCSP32-201ENST00000440548 321 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 AL353705.4-201ENST00000449661 238 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 RPL23AP75-201ENST00000491601 451 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 SNORD116-28-201ENST00000516123 91 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 MRPS18CP4-201ENST00000535821 231 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 MIR4782-201ENST00000577987 79 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 AC008079.2-201ENST00000623543 20396 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 AL136964.1-201ENST00000622038 2990 ntBASIC5.1□□□□□ -1.59
RNF135Q8IUD6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF135Q8IUD6 AC000123.3-201ENST00000624029 4975 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms