Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 SNORA25.17-201ENST00000517184 124 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 COPS8P3-201ENST00000526024 482 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 ZNF192P1-203ENST00000565888 810 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 AC006270.2-201ENST00000578523 652 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 MIR4738-201ENST00000579134 87 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 AC078795.3-201ENST00000602913 472 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 AL670379.10-201ENST00000604330 253 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 AL670379.9-201ENST00000605428 253 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 AC005183.1-201ENST00000603687 1979 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 PWAR6-201ENST00000552334 4618 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 MTCO1P12-201ENST00000414273 1543 ntBASIC4.05□□□□□ -1.76
CCDC178Q5BJE1 UBE2L2-201ENST00000254302 429 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 RNU6-512P-201ENST00000364438 103 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 RNU6-1227P-201ENST00000383981 107 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 MIR514A1-201ENST00000385133 98 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 RNU6-370P-201ENST00000411008 104 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 AF228730.4-201ENST00000421457 183 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 AL669831.1-202ENST00000428504 417 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 SAR1AP4-201ENST00000429225 591 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 AL592045.1-201ENST00000429867 352 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 GTF2IP13-201ENST00000438487 386 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 BRK1P2-201ENST00000442875 223 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 snoU13.4-201ENST00000458916 104 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 snoU13.24-201ENST00000458998 104 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 RNU7-167P-201ENST00000459160 62 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 RNU6-914P-201ENST00000516749 109 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 RNA5SP454-201ENST00000517231 127 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 RNU6-323P-201ENST00000521915 107 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 AC090115.3-201ENST00000553218 849 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 MIR3941-201ENST00000582572 103 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 AC084757.4-201ENST00000616350 526 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 AL360181.4-201ENST00000621752 134 ntBASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC178Q5BJE1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 RNA5SP72-201ENST00000364442 117 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 EI24P2-201ENST00000397776 1076 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 MTCYBP4-201ENST00000401524 249 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AL590004.1-201ENST00000405321 300 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 MIR548K-201ENST00000408406 116 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AL513331.1-201ENST00000411908 397 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 RPL21P90-201ENST00000415692 466 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 RPLP0P7-201ENST00000416050 667 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AC017079.2-201ENST00000416102 485 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AL353729.1-201ENST00000425044 720 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AL591704.1-201ENST00000432574 275 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AC012181.1-201ENST00000479895 423 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 RPS27P27-201ENST00000498779 255 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 SNORA31.3-201ENST00000516029 96 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 RNU6-1332P-201ENST00000516666 104 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 RNA5SP471-201ENST00000516971 106 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 RNU6-1073P-201ENST00000517182 106 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 IGKV2-26-201ENST00000518305 343 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AP005639.2-201ENST00000527592 928 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AL442663.2-201ENST00000554385 511 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 MED28P6-201ENST00000558776 231 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 MIR3944-201ENST00000581277 108 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AC012119.1-201ENST00000603184 222 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 MIR7975-201ENST00000619350 68 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AC090971.5-201ENST00000621102 293 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 AL512643.1-201ENST00000635735 524 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 U6.105-201ENST00000637379 88 ntBASIC4.03□□□□□ -1.76
CCDC178Q5BJE1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC017071.1-201ENST00000564407 2204 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.132-201ENST00000363421 102 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.212-201ENST00000364177 102 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 RNU1-33P-201ENST00000364249 162 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 RNU6-1303P-201ENST00000364841 107 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 RNU6-45P-201ENST00000384471 107 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AP000907.1-201ENST00000428428 510 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 HMGN2P21-201ENST00000447764 270 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC117503.1-201ENST00000472241 394 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC093663.1-201ENST00000497190 394 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms