Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AC174048.1-201ENST00000603389 144 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AL161798.1-201ENST00000604630 131 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AP001836.1-201ENST00000604675 523 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AC006077.1-201ENST00000604746 343 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AC113139.1-201ENST00000605049 239 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 RMST_8.1-201ENST00000610287 165 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 MTND4P14-201ENST00000435799 1354 ntBASIC3.76□□□□□ -1.81
SLC44A4Q53GD3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 Y_RNA.431-201ENST00000384086 102 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 RPL31P12-201ENST00000422587 358 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 MTND2P23-201ENST00000422990 651 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AL356867.1-201ENST00000429623 299 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 ERLEC1P1-201ENST00000433806 578 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AC092573.2-201ENST00000434546 243 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AL590639.1-201ENST00000456484 337 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AC007547.1-201ENST00000462177 490 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 RPS20P22-201ENST00000473700 357 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 RPS4XP13-201ENST00000483219 789 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 APOOP4-201ENST00000513530 597 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 BNIP3P6-201ENST00000549284 499 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AL138889.2-201ENST00000603883 242 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AL360085.1-201ENST00000604713 532 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 DUSP12P1-201ENST00000612874 516 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 uc_338.11-201ENST00000619132 160 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 Z99571.1-201ENST00000636677 394 ntBASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SLC44A4Q53GD3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 RNU2-37P-201ENST00000410695 177 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AL160275.3-201ENST00000423876 471 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AC005300.1-201ENST00000428401 373 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AC005019.1-201ENST00000436455 431 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AC087588.1-201ENST00000462203 316 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AP001486.1-201ENST00000463339 476 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AL049873.1-201ENST00000480540 376 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AC009901.1-201ENST00000506703 541 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 RNU2-27P-201ENST00000516185 142 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 RNU6-327P-201ENST00000516270 127 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AP001804.3-201ENST00000525146 880 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AL137161.1-201ENST00000532231 390 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 SYF2P1-201ENST00000550658 413 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AL137849.1-201ENST00000604767 169 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 YPEL5P2-201ENST00000605553 359 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 MIR8057-201ENST00000620957 69 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AL133383.2-201ENST00000622958 2336 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 AL512643.1-201ENST00000635735 524 ntBASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
SLC44A4Q53GD3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 IPO8P1-201ENST00000455509 3109 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 SNORA4.3-201ENST00000365564 137 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 Y_RNA.384-201ENST00000383909 102 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 RNU2-33P-201ENST00000410344 192 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC080125.1-201ENST00000414888 684 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 RPS24P13-201ENST00000442520 397 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 AC009237.8-201ENST00000445492 379 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 RPS15AP27-201ENST00000449183 343 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 SCARNA18-201ENST00000459004 134 ntBASIC3.73□□□□□ -1.81
SLC44A4Q53GD3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms