Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR373-201ENST00000362273 69 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RFX7Q2KHR2 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 MIR16-1-201ENST00000385271 89 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AC018630.2-202ENST00000422992 927 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AL590233.1-201ENST00000430017 456 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.29□□□□□ -2.2
RFX7Q2KHR2 RN7SKP49-201ENST00000516675 260 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AC019176.1-201ENST00000518519 225 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.29□□□□□ -2.2
RFX7Q2KHR2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AC109446.2-201ENST00000567872 497 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.29□□□□□ -2.2
RFX7Q2KHR2 AL163051.2-201ENST00000618976 735 ntBASIC1.29□□□□□ -2.2
RFX7Q2KHR2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
RFX7Q2KHR2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 MIR513A1-201ENST00000385138 129 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 BTF3L4P2-201ENST00000392798 346 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 AC244453.4-201ENST00000419150 388 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 AC246680.2-201ENST00000422106 389 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RFX7Q2KHR2 AC007742.1-201ENST00000425789 329 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 AC244035.1-201ENST00000430042 390 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 ELOCP26-201ENST00000436067 329 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 RPS15AP5-201ENST00000436276 388 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.28□□□□□ -2.2
RFX7Q2KHR2 RPS29P28-201ENST00000446439 141 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 MTCO1P48-201ENST00000448024 1096 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 MTND2P6-201ENST00000455337 1030 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 AC048346.1-201ENST00000510247 144 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 SCARNA15.2-201ENST00000516409 127 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 NIFKP8-201ENST00000560500 874 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 AC093519.1-201ENST00000566109 298 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.28□□□□□ -2.2
RFX7Q2KHR2 RMST_10.1-201ENST00000616309 154 ntBASIC1.28□□□□□ -2.2
RFX7Q2KHR2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.27□□□□□ -2.21
RFX7Q2KHR2 ZNF29P-201ENST00000225587 168 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 RNU6-251P-201ENST00000363235 104 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 SNORA18.2-201ENST00000383865 132 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 MIR514A1-201ENST00000385133 98 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 HMGB1P17-201ENST00000403495 628 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 RNU2-63P-201ENST00000410792 194 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 UBE2FP1-201ENST00000416536 447 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 CCDC58P2-201ENST00000417131 366 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 MTND4LP14-201ENST00000429447 288 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.27□□□□□ -2.21
RFX7Q2KHR2 UBE2V2P3-201ENST00000433562 437 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
RFX7Q2KHR2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.27□□□□□ -2.21
RFX7Q2KHR2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.27□□□□□ -2.21
RFX7Q2KHR2 AP003066.2-201ENST00000529375 555 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.27□□□□□ -2.21
RFX7Q2KHR2 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 AL161729.4-201ENST00000604650 476 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 MTND4LP5-201ENST00000605152 292 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 AC103810.8-201ENST00000607347 118 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 AL445493.3-201ENST00000619568 477 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 AP003476.1-201ENST00000623984 516 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 AL512506.2-201ENST00000624472 458 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 AC132825.7-201ENST00000638744 335 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 MFSD8-213ENST00000641134 1327 ntBASIC1.27□□□□□ -2.21
RFX7Q2KHR2 SNORD14B-201ENST00000364533 90 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AL139098.1-201ENST00000407291 389 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 RNU2-49P-201ENST00000410666 184 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 EIF4EP2-201ENST00000422816 654 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AL590623.1-201ENST00000427864 105 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 MTND2P29-201ENST00000438595 412 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC079448.1-201ENST00000449377 373 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 HMGB1P36-201ENST00000487709 576 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC114801.2-201ENST00000503825 781 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 MIR449C-201ENST00000516047 92 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 RNA5SP291-201ENST00000517222 105 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC022254.1-201ENST00000567857 235 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC008121.1-201ENST00000603244 268 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 DUXAP11-201ENST00000603858 526 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AP000238.1-201ENST00000608759 426 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC099842.1-201ENST00000619919 596 ntBASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RFX7Q2KHR2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 RNU2-41P-201ENST00000410991 178 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC092047.1-201ENST00000424997 240 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 Z82210.1-201ENST00000440037 231 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AC007000.2-201ENST00000442564 487 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 KATNBL1P3-201ENST00000443475 909 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 AL050341.1-201ENST00000447743 313 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 COX6CP18-201ENST00000448769 222 ntBASIC1.25□□□□□ -2.21
RFX7Q2KHR2 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.25□□□□□ -2.21
RFX7Q2KHR2 RPL26P9-201ENST00000457466 433 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms