Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN1BQ07699 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN1BQ07699 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SCN1BQ07699 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN1BQ07699 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SCN1BQ07699 VTRNA1-1-201ENST00000363120 99 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 Y_RNA.576-201ENST00000384781 102 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 MIR7-3-201ENST00000384898 110 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 MIR183-201ENST00000384958 110 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 MIR670-201ENST00000390142 98 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 U3.19-201ENST00000390893 196 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.6□□□□□ -1.99
SCN1BQ07699 AL592148.1-201ENST00000413568 445 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN1BQ07699 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN1BQ07699 AL627311.1-201ENST00000431514 115 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN1BQ07699 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN1BQ07699 VN1R34P-201ENST00000447387 883 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 RPL23AP20-201ENST00000447965 421 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 EEF1B2P7-201ENST00000451177 676 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN1BQ07699 AC090525.1-201ENST00000479116 478 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC096576.1-201ENST00000489014 359 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 RPL22P13-201ENST00000493291 347 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN1BQ07699 MTCO3P28-201ENST00000513351 515 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 RN7SKP272-201ENST00000516988 232 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 RNU6-685P-201ENST00000517088 95 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC135279.1-201ENST00000543493 504 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC012213.3-201ENST00000577199 777 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN1BQ07699 AC245014.2-201ENST00000603689 287 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC246785.4-201ENST00000605374 287 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC087045.1-201ENST00000605856 382 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN1BQ07699 U6.42-201ENST00000618440 107 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC012314.7-201ENST00000619693 93 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 AC092656.1-203ENST00000624134 423 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 Z75746.1-201ENST00000440243 2080 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN1BQ07699 HSPA8P4-201ENST00000511877 1920 ntBASIC2.6□□□□□ -1.99
SCN1BQ07699 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SCN1BQ07699 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SCN1BQ07699 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SCN1BQ07699 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SCN1BQ07699 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.59□□□□□ -1.99
SCN1BQ07699 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -1.99
SCN1BQ07699 RNU1-35P-201ENST00000362782 153 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 SNORA62.1-201ENST00000364287 154 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 MIR181A2-201ENST00000384863 110 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.59□□□□□ -1.99
SCN1BQ07699 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.59□□□□□ -1.99
SCN1BQ07699 NUP35P1-201ENST00000422734 947 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.59□□□□□ -1.99
SCN1BQ07699 YME1L1P1-201ENST00000429435 297 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.59□□□□□ -1.99
SCN1BQ07699 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.59□□□□□ -1.99
SCN1BQ07699 Z75741.1-201ENST00000446793 314 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 AC112771.1-201ENST00000463581 102 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 DYNLL1P5-201ENST00000467158 270 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.59□□□□□ -1.99
SCN1BQ07699 AC109925.1-201ENST00000478069 331 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 RPS29P2-201ENST00000479278 136 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.59□□□□□ -1.99
SCN1BQ07699 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.59□□□□□ -1.99
SCN1BQ07699 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.59□□□□□ -1.99
SCN1BQ07699 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SCN1BQ07699 MIR5680-201ENST00000577577 84 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 MIR3913-1-201ENST00000577744 102 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 MIR5571-201ENST00000577998 113 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SCN1BQ07699 Z84480.1-201ENST00000605131 311 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SCN1BQ07699 AL158063.1-201ENST00000615349 536 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 AC138932.5-201ENST00000617759 563 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.59□□□□□ -1.99
SCN1BQ07699 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.59□□□□□ -1.99
SCN1BQ07699 AC138627.2-201ENST00000624202 601 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 MIR3974-201ENST00000637126 96 ntBASIC2.59□□□□□ -1.99
SCN1BQ07699 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCN1BQ07699 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SCN1BQ07699 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.58□□□□□ -2
SCN1BQ07699 RNA5SP125-201ENST00000364843 120 ntBASIC2.58□□□□□ -2
SCN1BQ07699 SNORD115-7-201ENST00000365306 82 ntBASIC2.58□□□□□ -2
SCN1BQ07699 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCN1BQ07699 MIR1302-8-201ENST00000408342 128 ntBASIC2.58□□□□□ -2
SCN1BQ07699 U3.37-201ENST00000408528 213 ntBASIC2.58□□□□□ -2
SCN1BQ07699 RNU6-387P-201ENST00000411331 105 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
SCN1BQ07699 CYCSP48-201ENST00000417124 323 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.58□□□□□ -2
SCN1BQ07699 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.58□□□□□ -2
SCN1BQ07699 CALM2P2-201ENST00000428512 440 ntBASIC2.58□□□□□ -2
SCN1BQ07699 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms