Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.67□□□□□ -1.98
GABPAQ06546 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.67□□□□□ -1.98
GABPAQ06546 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
GABPAQ06546 RNU5E-1-201ENST00000362477 120 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 SMIM11P1-201ENST00000369586 178 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 MIR221-201ENST00000385135 110 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.66□□□□□ -1.98
GABPAQ06546 MIR888-201ENST00000401186 77 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 RNA5SP492-201ENST00000411330 114 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC127391.1-201ENST00000411737 98 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC009518.2-201ENST00000418056 731 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 RPL36AP53-201ENST00000432891 316 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.66□□□□□ -1.98
GABPAQ06546 AL033528.1-201ENST00000453780 140 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 RNU6-953P-201ENST00000459154 107 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC009901.1-201ENST00000506703 541 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 NDUFB4P2-201ENST00000509515 391 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC010486.3-201ENST00000511602 785 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 RNU7-51P-201ENST00000516560 62 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 RNU6-143P-201ENST00000516942 93 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.66□□□□□ -1.98
GABPAQ06546 MTND2P38-201ENST00000522536 667 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 IGKV3-31-201ENST00000523109 329 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 MTCYBP20-201ENST00000524239 1129 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 HSPE1P20-201ENST00000538133 289 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.66□□□□□ -1.98
GABPAQ06546 AC105137.2-201ENST00000569073 466 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC137800.2-201ENST00000574375 120 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC060766.3-201ENST00000591442 263 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AL590229.1-201ENST00000603497 542 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 BNIP3P9-201ENST00000603714 553 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AL136363.1-201ENST00000605349 337 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 RPL23AP88-201ENST00000605759 454 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.66□□□□□ -1.98
GABPAQ06546 AC008498.1-201ENST00000613012 531 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AL133173.2-201ENST00000614270 90 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AC002064.3-201ENST00000623448 346 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.66□□□□□ -1.98
GABPAQ06546 MIR3974-201ENST00000637126 96 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 AP003399.1-201ENST00000637534 361 ntBASIC2.66□□□□□ -1.98
GABPAQ06546 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.66□□□□□ -1.98
GABPAQ06546 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.66□□□□□ -1.98
GABPAQ06546 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
GABPAQ06546 RNU4-1-201ENST00000363925 141 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 MIR767-201ENST00000390228 109 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
GABPAQ06546 RNU2-8P-201ENST00000410727 190 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 HMGN1P14-201ENST00000412459 517 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 RPS12P24-201ENST00000412619 387 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 HMGB3P12-201ENST00000438745 556 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
GABPAQ06546 PGBD4P3-201ENST00000440731 581 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 MTND6P13-201ENST00000443510 523 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 RPL23AP20-201ENST00000447965 421 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
GABPAQ06546 AC093899.1-201ENST00000457984 376 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 RNA5SP269-201ENST00000459032 137 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 snoU109.1-201ENST00000459339 135 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 MTCO2P29-201ENST00000465212 189 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 RPL39P36-201ENST00000490784 156 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.99
GABPAQ06546 AC114786.4-201ENST00000508771 728 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 AC098799.2-201ENST00000509466 868 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 AC091965.2-201ENST00000512324 613 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.65□□□□□ -1.99
GABPAQ06546 AC005771.1-201ENST00000585581 349 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 AL645944.1-201ENST00000603857 493 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 Z94722.1-201ENST00000604328 474 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 AC091304.9-201ENST00000612091 226 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 UCA1.1-201ENST00000620952 75 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 AC110994.2-201ENST00000635481 492 ntBASIC2.65□□□□□ -1.99
GABPAQ06546 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
GABPAQ06546 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
GABPAQ06546 RNU6-960P-201ENST00000364056 120 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 RNY1P12-201ENST00000364251 105 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 RNU6-946P-201ENST00000383878 107 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 RPL23AP32-201ENST00000395315 459 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 RNU4-26P-201ENST00000410270 107 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 AC090960.1-201ENST00000421072 306 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.64□□□□□ -1.99
GABPAQ06546 HMGN2P30-201ENST00000423237 256 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 AL592045.1-201ENST00000429867 352 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.64□□□□□ -1.99
GABPAQ06546 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.64□□□□□ -1.99
GABPAQ06546 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.64□□□□□ -1.99
GABPAQ06546 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.64□□□□□ -1.99
GABPAQ06546 AP000705.1-201ENST00000454567 350 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
GABPAQ06546 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.64□□□□□ -1.99
GABPAQ06546 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.64□□□□□ -1.99
GABPAQ06546 AP000873.5-201ENST00000533906 236 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.64□□□□□ -1.99
GABPAQ06546 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
GABPAQ06546 AL355877.2-201ENST00000603670 358 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms