Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC117503.1-201ENST00000472241 394 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 AC011005.2-201ENST00000487324 359 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.32□□□□□ -2.2
H3F3AP84243 RNU6-390P-201ENST00000516259 103 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.32□□□□□ -2.2
H3F3AP84243 AC122134.1-202ENST00000569111 1201 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 AC016925.2-201ENST00000605108 242 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 AC017037.3-201ENST00000625016 472 ntBASIC1.32□□□□□ -2.2
H3F3AP84243 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.32□□□□□ -2.2
H3F3AP84243 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.32□□□□□ -2.2
H3F3AP84243 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.32□□□□□ -2.2
H3F3AP84243 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.32□□□□□ -2.2
H3F3AP84243 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
H3F3AP84243 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
H3F3AP84243 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
H3F3AP84243 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
H3F3AP84243 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
H3F3AP84243 RNU6-1167P-201ENST00000363227 94 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 RNU1-23P-201ENST00000363361 144 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 RNU1-42P-201ENST00000364033 160 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
H3F3AP84243 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
H3F3AP84243 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
H3F3AP84243 RNU6-482P-201ENST00000391068 107 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 UBE2V1P15-201ENST00000407776 448 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 UBE2FP1-201ENST00000416536 447 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AC007098.1-201ENST00000420122 367 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 RPL7P34-201ENST00000433316 712 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 RPL23AP76-201ENST00000441860 458 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 SEPT14P24-201ENST00000447236 180 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
H3F3AP84243 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.31□□□□□ -2.2
H3F3AP84243 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.31□□□□□ -2.2
H3F3AP84243 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.31□□□□□ -2.2
H3F3AP84243 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
H3F3AP84243 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.31□□□□□ -2.2
H3F3AP84243 MRPS36P5-201ENST00000551909 298 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AL356432.3-201ENST00000568952 465 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AC103987.3-201ENST00000582071 292 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AL713866.2-201ENST00000603579 219 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AC069304.2-201ENST00000605154 435 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AC018638.7-201ENST00000605836 1114 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AL391813.2-201ENST00000609113 322 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AC009237.15-201ENST00000610252 501 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AC008121.3-201ENST00000618726 433 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 AC010975.3-201ENST00000618727 978 ntBASIC1.31□□□□□ -2.2
H3F3AP84243 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
H3F3AP84243 U8.1-201ENST00000362843 134 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 U8.10-201ENST00000384260 133 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 RNU6-754P-201ENST00000391166 107 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 AL513185.2-201ENST00000425543 193 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.3□□□□□ -2.2
H3F3AP84243 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.3□□□□□ -2.2
H3F3AP84243 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.3□□□□□ -2.2
H3F3AP84243 KATNBL1P6-201ENST00000453433 915 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.3□□□□□ -2.2
H3F3AP84243 AC008628.1-201ENST00000508663 265 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 FAM206BP-201ENST00000510179 541 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.3□□□□□ -2.2
H3F3AP84243 RNU6-927P-201ENST00000516199 100 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.3□□□□□ -2.2
H3F3AP84243 NDUFA5P6-201ENST00000542110 379 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.3□□□□□ -2.2
H3F3AP84243 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.3□□□□□ -2.2
H3F3AP84243 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.3□□□□□ -2.2
H3F3AP84243 SNRPGP17-201ENST00000603780 214 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 AC005332.6-201ENST00000613178 446 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 AC120349.2-201ENST00000625002 298 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 AC107982.1-201ENST00000507171 1300 ntBASIC1.3□□□□□ -2.2
H3F3AP84243 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
H3F3AP84243 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
H3F3AP84243 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.3□□□□□ -2.2
H3F3AP84243 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
H3F3AP84243 RNU6-661P-201ENST00000362409 107 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 RNU5E-1-201ENST00000362477 120 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 RNU6-359P-201ENST00000365466 108 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 RNU6-432P-201ENST00000384196 109 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 RNU6-1207P-201ENST00000384343 107 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 RNU6-114P-201ENST00000384704 105 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
H3F3AP84243 AL590084.2-201ENST00000401481 382 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 RN7SKP51-201ENST00000410781 304 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 AL353621.1-201ENST00000418219 243 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.29□□□□□ -2.2
H3F3AP84243 GPM6BP2-201ENST00000432046 144 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 RPS15AP9-201ENST00000439856 381 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.29□□□□□ -2.2
H3F3AP84243 GPM6BP1-201ENST00000446387 144 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.29□□□□□ -2.2
H3F3AP84243 AC006512.1-201ENST00000468816 291 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 FO393415.2-201ENST00000480085 343 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.29□□□□□ -2.2
H3F3AP84243 Y_RNA.675-201ENST00000516389 149 ntBASIC1.29□□□□□ -2.2
H3F3AP84243 RN7SKP219-201ENST00000516825 296 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms